Sequence detailsbmy_17082 (Coding sequence)

Part of scaffold_1452 (SequenceType object (1))

For more information consult the page for scaffold_1452 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PLXNA1ENSTTRG00000002382 (Bottlenosed dolphin)

Gene Details

plexin A1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002232, Bottlenosed dolphin)

Protein Percentage 88.94%
cDNA percentage 88.04%
Ka/Ks Ratio 0.03055 (Ka = 0.0071, Ks = 0.2312)

PLXNA1ENSBTAG00000009159 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000030566, Cow)

Protein Percentage 95.64%
cDNA percentage 92.1%
Ka/Ks Ratio 0.02214 (Ka = 0.0216, Ks = 0.9753)

PLXNA1 (Minke Whale)

Gene Details

plexin A1

External Links

Gene match (Identifier: BACU009846, Minke Whale)

Protein Percentage 94.88%
cDNA percentage 95.55%
Ka/Ks Ratio 0.15417 (Ka = 0.0295, Ks = 0.1913)

Additional orthologs identified in other species via the OPTIC pipeline.

PLXNA1 (Human)   Plxna1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 5433 bp    Location:15668..54576   Strand:+
Raw sequence 
>bmy_17082
ATGCGCATCCCTGCAGGACCTGAGTGCCGCAGCCCGAGGCCGCAGCCCGTCATGCTGCTGCCACATCTGAGCCCACGGGCGCTGCTGCCGCCACTGCTTTTGCTGCTGCTGCTGCTGGGGGCCGCGCCCCGGGCGGGTGGGGGTCCACAGCCCCCTTTCCGCACCTTCACGGCCAGTGACTGGGCCCTCACCCACCTGGTGGTCCACGAGCAGACGGGCGAGGTGTACGTGGGCGCCGTGAACCGCATCTACAAGCTGTCGGGGAACCTGACACTGCTGCGGGCGCACGTGACGGGCCCCGTGGAGGACAATGAGAAGTGCTACCCGCCGCCCAGCGTGCAGTCCTGCCCGCACGGCTTGGGCAGCACCGACAACGTCAATAAGCTGTTGCTCCTGGACCAGGCCGCCAACCGCCTGCTGGCCTGTGGCAGCGCCTCGCAGGGCATCTGCCAGTTCCTGCGGCTGGACGACCTCTTCAAGCTGGGCGAGCCCCACCACCGCAAGGAGCACTACCTGTCGGGCGTGCGCGAGGCGGGCAGCATGGCGGGCGTGCTGATCGCCGGGCCTCCCGGCCAGGCGCAGGCCAAGCTCTTCGTGGGCACGCCCATCGACGGCAAGTCCGAGTACTTCCCCACGCTGTCCAGCCGCCGGCTCATGGCCAACGAGGAGGATGCCGAGATGTTCGGTTTCGTGTACCAGGACGAGTTCGTGTCCTCGCAGCTGAAGATCCCCTCGGACACGCTGTCCAAGTTCCCGGCCTTCGACATCTACTACGTGTACAGCTTCCGCAGCGAGCACTTCGTCTACTACCTTACCCTGCAGCTGGACACGCAGCTGACCTCGCCCGACGCCGCCGGCGAGCACTTCTTCACGTCCAAGATCGTGCGGCTGTGCGTGGACGACCCCAAGTTCTACTCCTACGTCGAGTTCCCCATCGGCTGCGAGCAGGCGGGCGTGGAGTACCGCCTGGTGCAGGACGCCTACCTGAGTCGGCCTGGCCGCGCCCTGGCCCGCCAGCTGGGCCTGGCCGAGGACGAGGAGGTGCTGTTCACCGTGTTCGCCCAGGGCCAGAAGAACCGCGTGAAGCCGCCCCGGGAGTCGGTGCTGTGCCTCTTCACGCTCAGGGCCATCAAGGAAAAGATCAAGGAGCGCATCCAGTCCTGCTACCGCGGCGAGGGCAAGCTCTCGCTGCCCTGGCTGCTCAACAAGGAGCTGGGCTGCATCAACTCGCCTCTCCAGATCGACGACGACTTCTGCGGGCAGGACTTCAACCAGCCGCTGGGCGGCACGGTCACCATCGAGGGGACGCCCCTGTTCGTGGACAAGGACGACGGTCTGACCGCTGTGGCCGCCTACGACTACCGGGGCCGCACCGTGGTGTTCGTGGGCACACGCAGCGGCCGCATCCGCAAGATCCTGGTGGACCTGGCGAACCCCGGCGGCCGGCCGGCCCTGGCCTACGAGAGCGTGGTGGCCCAAGAGGGCAGCCCCATCCTGCGTGACCTGGTCCTCAGCCCCGACCGCCAGTACCTGTACGCCATGACGGAAAAGCAGGTGACTCGGGTGCCCGTGGAGAGCTGTGTGCAGTACAGGTCGTGTGAGCTGTGCCTGGGGTCACGGGACCCCCACTGCGGCTGGTGTGTCCTGCACAGCACCTGCTCCCGCCGGGACGCCTGCGAGCGGGCGGCTGAGCCCCAGCGCTTCGCCGCGGACCTGCTGCAGTGCGTACAGCTGACCGTGCAGCCCCGCAACGTGTCCGTGACCACGTCTCAGGTTCCGCTTGTGCTGCAGGCCTGGAATGTGCCCGACCTCTCGGCCGGCGTCAACTGCTCCTTCGAGGACTTCACCGAGTCCGAGGGCGTCCTGGAGGATGGCCGGATTCACTGCCGCTCCCCCTCTGCGCGGGAGGTGGCGCCCATCACGCGGGGCCAAGGAGACCAGCGGGTGGTCAAGCTCTACCTGAAGTCCAAGGAGACGGGCAAGAAGTTTGCGTCCGTGGACTTCGTCTTCTACAACTGCAGCGTCCACCAGTCCTGCCTGTCCTGCGTCAGCGGCTCCTTCCCCTGCCACTGGTGCAAGTACCGCCACGTGTGCACACACAACGCCGCCGACTGTGCCTTCCTGGAGGGCCGTGTCAACGTGTCTGAGGACTGCCCGCAGATCCTGCCCTCCACCCAGATCTACGTGCCGGTGGGTGTGGTGAAGCCCATCACCCTGGCCGCCCGGAACCTGCCGCAGCCGCAGTCGGGCCAGCGGGGCTATGAGTGCCTGTTCCACCTCCCGGGGGGCCCGGCCCGCGTCGCCGCCCTGCGCTTCAACAGCTCCAGCCTGCAGTGCCAGAACTCCTCGTACTCCTACGAAGGCAACGACGTCAGTGACCTGCCCGTGAACCTGTCCGTGGTGTGGAATGGCCACTTCGTCATCGACAACCCGCAGAACATCCAGGCCCACCTGTACAAGTGCCCGGCCCTGCGGGAGAGCTGCGGTCTCTGCCTCAAGGCCGACCCTCGCTTCGAGTGCGGCTGGTGTGTGGCCGAGCGCCGCTGTTCCCTGCGCCCCCACTGCCCCGCGGACTCGCCCGCTGCCTGGATGCACGCCCGCCACGGCAGCAGCCGCTGCGCCGACCCCAAGATCCTCAAGCTGTCCCCTGAGACGGGCCCGCGGCAGGGAGGCACGCGGCTCACCATCACGGGCGAGAACCTGGGGCTGCGCTTTGAGGACGTGCGGCTGGGCGTGCGCGTGGGCAAGGTGCTGTGCAGCCCCGTGGAGAGCGAGTACATCAGCGCTGAGCAGATCGTCTGCGAGATCGGGGACGCCAGCGCGGTGCGGGCCCACGATGCCTTGGTGGAGGTGTGCGTGCGGGACTGCTCCCCCCACTACCGCGCCCTGTCACCCAAGCGCTTCACCTTTGTGACACCGACCTTCTACCGTGTGAGTCCTGCCCGAGGGCCCCTTTCAGGGGGCACCTGGATCGGCATCGAGGGTAGCCACCTGAACGCAGGCAGCGACGTGGCTGTGAGGAATTCCCGGGAGATCCGATGCCTGACGCCCCCGGGGCAGAGCCCCGGCAGTGCCCCCATCGTCATCAACATCAACCGTGCTCAGCTCACCAACCCCGAGGTCAAATACAACTACACCGAGGACCCCACCATCCTGAGGATCGACCCCGAGTGGAGCATCAACAGCGGAGGAACCCTCCTAACGGTCACGGGCACCAACCTGGCCACCGTCCGCGAACCCCGCATCCGGGCCAAGTACGGAGGCGTCGAGAGGGAGAACAGCTGCCTAGTGTACAACGACACCACCATGGTGTGCCGGGCCCCGTCGGTGGACAACCCTGCCCGCAGCCCGCCCGAGCTGGGCGAGCGGCCCGACGAGCTGGGCTTTGTCATGGACGACGTCCGGGCCTTGCTGGTGCTCAACACCTCGACCTTCCTCTACTACCCGGACCCTGTGCTGGAGCCGCTCAGCCCCACCGGCCTCCTGGAGCTGAAGCCCAGCTCGCCCCTCATCCTCAAGGGCCGCAACCTCCTGCCACCAGCGCCCGGCAACTCCCGGCTCAACTACACCGTGCTCATCGGCTCCACGCCCTGCGCCCTCACCGTGTCGGAGACGCAGCTGCTCTGCGAGTCGCCCAACCTCACCGGGCAGCACAAGGTCACGGTCCGGGCCGGCGGCTTCGAGTTCTCGCCGGGGGTGCTGCAGGTGTACTCGGACAGCCTGCTGACGCTGCCCGCCATCGTGGGCATCGGCGGGGGCGGGGGCCTCCTGCTGCTGGTCATCGTGGCCGTGCTCATCGCCTACAAGCGCAAGTCGCGGGACGCCGACCGCACCCTCAAGCGCCTGCAGCTCCAGATGGACAACCTGGAGTCGCGCGTGGCCCTCGAGTGCAAGGAAGCCTTTGCGGAGCTGCAGACGGACATCCACGAGCTGACCAGCGACCTGGACGGTGCCGGCATCCCGTTCCTCGACTACCGCACGTACGCCATGCGGGTCCTCTTCCCCGGCATCGAGGACCACCCGGTGCTCAAGGAGATGGAGGTGCAGGCTAACGTGGAGAAGTCGCTGACACTGTTCGGGCAGCTGCTGACCAAGAAGCACTTCCTGCTGACCTTCATCCGTACGCTGGAGGCCCAGCGCAGCTTCTCCATGCGGGACCGCGGCAATGTGGCCTCGCTCGTCATGACGGCCCTGCAGGGCGAGATGGAGTACGCCACGGGCGTGCTCAAGCAGCTGCTGTCTGACCTCATCGAGAAGAACCTGGAAAGCAAGAACCACCCGAAGCTGTTGCTGCGGCGGACTGAGTCGGTGGCAGAGAAGATGCTGACCAACTGGTTCACCTTCCTTCTGTACAAATTCCTCAAGGAGTGCGCCGGGGAGCCGCTCTTCMTGCTCTACTGCGCCATCAAGCAGCAGATGGAGAAGGGCCCCATCGACGCCATCACGGGCGAGGCGCGCTACTCCCTGAGCGAGGACAAGCTCATCCGCCAGCAGATCGACTACAAGACGCTGACCCTGAACTGCGTGAACCCCGAGAACGAGAACGCGCCCGAGGTGCCGGTGAAGGGGCTGAACTGCGACACGGTGACGCAGGTCAAGGAGAAGCTGCTGGACGCCGTGTACAAGGGCGTGCCCTACTCCCAGCGGCCCAAGGCCGGGGACATGGACCTGGAGTGGCGCCAGGGCCGCATGGCCCGCATCATCCTGCAGGATGAGGACGTCACCACCAAGATCGATAACGACTGGAAGAGGCTGAACACGCTGGCGCACTACCAGAACCACGACCACCTGGACCAGCGCGAGGGCGACCGTGGCAGCAAGATGGTTTCCGAGATCTACCTGACGCGGCTGCTGGCCACCAAGGGCACGCTGCAGAAGTTTGTGGACGACCTCTTCGAGACCATCTTCAGCACGGCGCACCGGGGCTCGGCCTTGCCGCTGGCCATCAAGTACATGTTCGACTTCCTGGATGAGCAGGCCGACCAGCACCAGATCCACGACGCAGACAACCCGCAGTTCGTGTTCGACATCCACAAGAGCAGCATCACGGACGCCTGCCTGTCGGTGGTGGCCCAGACCTTCATGGACTCCTGCTCCACATCTGAGCACAAGCTGGGGAAGGACTCACCTTCCAACAAGCTGCTCTACGCCAAGGACATCCCCAACTACAAGAGCTGGGTGGAGAGGTACTACGCGGACATCGCCAAGATGCCCGCCATCAGCGACCAGGACATGAGCGCGTACCTGGCTGAGCAGTCGCGGCTGCACCTGAGCCAGTTCAACAGCATGAGTGCCCTGCACGAGATCTACTCCTACATCAGCAAGTACAAGGACGAGATCCTGACGGCCCTGGAGAAGGACGAGCAGGCACGGCGGCAGCGGCTCCGGAGCAAGTTGGAGCAGGTGGTGGACACCATGGCCCTGAGCAGCTGA

Related Sequences

bmy_17082T0 SequenceType object (3)

Length: 1811 aa      View alignments
>bmy_17082T0
MRIPAGPECRSPRPQPVMLLPHLSPRALLPPLLLLLLLLGAAPRAGGGPQPPFRTFTASDWALTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSCPHGLGSTDNVNKLLLLDQAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSGVREAGSMAGVLIAGPPGQAQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDAEMFGFVYQDEFVSSQLKIPSDTLSKFPAFDIYYVYSFRSEHFVYYLTLQLDTQLTSPDAAGEHFFTSKIVRLCVDDPKFYSYVEFPIGCEQAGVEYRLVQDAYLSRPGRALARQLGLAEDEEVLFTVFAQGQKNRVKPPRESVLCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDDDFCGQDFNQPLGGTVTIEGTPLFVDKDDGLTAVAAYDYRGRTVVFVGTRSGRIRKILVDLANPGGRPALAYESVVAQEGSPILRDLVLSPDRQYLYAMTEKQVTRVPVESCVQYRSCELCLGSRDPHCGWCVLHSTCSRRDACERAAEPQRFAADLLQCVQLTVQPRNVSVTTSQVPLVLQAWNVPDLSAGVNCSFEDFTESEGVLEDGRIHCRSPSAREVAPITRGQGDQRVVKLYLKSKETGKKFASVDFVFYNCSVHQSCLSCVSGSFPCHWCKYRHVCTHNAADCAFLEGRVNVSEDCPQILPSTQIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHLPGGPARVAALRFNSSSLQCQNSSYSYEGNDVSDLPVNLSVVWNGHFVIDNPQNIQAHLYKCPALRESCGLCLKADPRFECGWCVAERRCSLRPHCPADSPAAWMHARHGSSRCADPKILKLSPETGPRQGGTRLTITGENLGLRFEDVRLGVRVGKVLCSPVESEYISAEQIVCEIGDASAVRAHDALVEVCVRDCSPHYRALSPKRFTFVTPTFYRVSPARGPLSGGTWIGIEGSHLNAGSDVAVRNSREIRCLTPPGQSPGSAPIVININRAQLTNPEVKYNYTEDPTILRIDPEWSINSGGTLLTVTGTNLATVREPRIRAKYGGVERENSCLVYNDTTMVCRAPSVDNPARSPPELGERPDELGFVMDDVRALLVLNTSTFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNSRLNYTVLIGSTPCALTVSETQLLCESPNLTGQHKVTVRAGGFEFSPGVLQVYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTKKHFLLTFIRTLEAQRSFSMRDRGNVASLVMTALQGEMEYATGVLKQLLSDLIEKNLESKNHPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFXLYCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLNCVNPENENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVPYSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQNHDHLDQREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADQHQIHDADNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLSQFNSMSALHEIYSYISKYKDEILTALEKDEQARRQRLRSKLEQVVDTMALSS*