Part of scaffold_1452 (SequenceType object (1))

For more information consult the page for scaffold_1452 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPRA1ENSTTRG00000017103 (Bottlenosed dolphin)

Gene Details

transmembrane protein, adipocyte asscociated 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000016212, Bottlenosed dolphin)

Protein Percentage 12.71%
cDNA percentage 30.23%
Ka/Ks Ratio 0.10666 (Ka = 1.4566, Ks = 13.656)

TPRA1ENSBTAG00000022575 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000041130, Cow)

Protein Percentage 54.36%
cDNA percentage 62.05%
Ka/Ks Ratio 0.19447 (Ka = 0.4354, Ks = 2.2389)

TPRA1 (Minke Whale)

Gene Details

transmembrane protein, adipocyte asscociated 1

External Links

Gene match (Identifier: BACU007934, Minke Whale)

Protein Percentage 55.15%
cDNA percentage 64.26%
Ka/Ks Ratio 0.38938 (Ka = 0.4529, Ks = 1.1631)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 711 bp    Location:403686..395953   Strand:-
>bmy_17083
ATGAAGGCCCCAAGAGGGCAGGTGTGTCCTGGCACCTGGACCCGCCGGGTCATAGCAGGTGCTTGGCCATGTCAGCATCGGTGGAGGGGTGCAGAGCACGGGAACAGGGAGGAAACCAGCTTCTTTCCTTGGACCTACTGTGTCAGGCACACGTTCTCCCCTGTAATACCTCCCGTCCTTGGTGTATCCTCAGGCTGCCAATGGGGACGCCATCCCAGAGCCAGTGGGTGGCCTGCTAGGGTCCGGTACTGGGACCTCTTGCTGCTCGTCCCCAACGTGCTCTTCTTCATCTTCCTGCTCTGGAAGCTTCCGTTTGCTCGGGCCAAGATTCGAGTCACCTCCAGCCCCATTTTTATCACCTTCTATATCCTGGTGTTCGTGGTGGCGCTGGTGGGCATCGCCCGGGCCGTGGTGTCCATGACGGTCAGCACCTCAGATGCTGCGACTGTCGCTGATAAGGTGGGGCTGGGCCTGTTGGCAGGGCTGCTGGGCACTGGGAGGGGGCACCCGGCCCCCAGGCTGACGCTCTGCCCACTCTGTGTCCAGATCCTGTGGGAGATTACCCGCTTCTTCCTGCTGGCCATCGAGCTGAGCGTGGTCATCCTGGGCCTCGCCTTTGGTGCGTCTGCTGCTGCGGCCAGGGCTCCCCTGCCCCTCCCTGGCTGGGGGCCGACCCCACCGTGGTTCCCTAGGCTGGCTCCCGCTGACTGA

Related Sequences

bmy_17083T0 SequenceType object (3)

Length: 237 aa      View alignments
>bmy_17083T0
MKAPRGQVCPGTWTRRVIAGAWPCQHRWRGAEHGNREETSFFPWTYCVRHTFSPVIPPVLGVSSGCQWGRHPRASGWPARVRYWDLLLLVPNVLFFIFLLWKLPFARAKIRVTSSPIFITFYILVFVVALVGIARAVVSMTVSTSDAATVADKVGLGLLAGLLGTGRGHPAPRLTLCPLCVQILWEITRFFLLAIELSVVILGLAFGASAAAARAPLPLPGWGPTPPWFPRLAPAD*