Part of scaffold_1452 (Scaffold)

For more information consult the page for scaffold_1452 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PODXL2 ENSTTRG00000017107 (Bottlenosed dolphin)

Gene Details

podocalyxin-like 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016216, Bottlenosed dolphin)

Protein Percentage 93.44%
cDNA percentage 96.72%
Ka/Ks Ratio 0.53583 (Ka = 0.0282, Ks = 0.0526)

PODXL2 ENSBTAG00000018031 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041120, Cow)

Protein Percentage 76.37%
cDNA percentage 82.35%
Ka/Ks Ratio 0.21118 (Ka = 0.1369, Ks = 0.6484)

PODXL2  (Minke Whale)

Gene Details

podocalyxin-like 2

External Links

Gene match (Identifier: BACU007931, Minke Whale)

Protein Percentage 97.36%
cDNA percentage 98.31%
Ka/Ks Ratio 0.25801 (Ka = 0.0102, Ks = 0.0397)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1377 bp    Location:462667..473806   Strand:+
>bmy_17086
TACGGTTTTCCAGACCTGACTGAGAAGGCTGGTCCCATAGAGGATACCGGCCAGAGTCAAGAGGGGGCGAGCCTCCCGTCTCCCCTGCCCAAGATGAGCCTGGTGGAGCCACCCTGGCATGTGGTCCCCGGAGAGGAGGAAGAGGAGGAGCAGCTGCTGCCTGTGACCAGGTCCCAAGAAGAATCCCAAAGTCAGGTCCACGGCTTTCCTCCCACCGGCAGCAGCCAGACCCCAGGGGCCCCCGAACACCGGCACGAAGAGTCTGGGGACCAGGCCTCCTCGGGTGTGGAGGTGGGGAGCAACATGGAGCCGAGCCTTTCCCCGCCCACAGTCACCCCAAGTCCAGTGACCCCGGGGGGTCAGGATGTGGCCGACTGGGGGCCAGGGGGCACGGCGCTGCCAGCCGCAGGGCACGGGCTAGAGTTGGAGGCCCCTCGGGAGCCCAGTGAGGAGGCCACTGCGGGAACAGCTGGCTTGGCCGGCCGGCCGGGGGAGGGACCGTCCCCGGCCTCGTTCCCTCAGACAGAAGCTCCCAGCGGGGCTGAGGCCTCAGACGAAGACCCCACGCACCCTGGAGCCTCAGCCTCTTTCTCACTGGCCCCTGGAGACATGGAGCTGACACCTTCCTCTGCTGCCGTGGGACGAGAAACCCTCAGCCAGCTGCCCCAGGAAGGGCAGACCGCCGACGCTCCGTCTAGAACACCCTGGGASTCCACGCAGGTGATCTGCAAAGACTGGAGCAACCTAGCCGGAAAGAACTACATCATCCTGACCATGGCGGAGAACGTGGACTGTGAGGTGTTCCGGCGGCACCGGGGGCTGCAGCTCCTGGCCCTGGTGGAGGGGGTGCTGCCCCGCCACGGCAGCGGCCGCCACGGGGACTGGCACATCTCCCTGAGCAAGCCCAGCGAGAAGGAGCAGCGCCTGCTGATGGCCTTGGTGGGCGAGCAGGGGGTGGTGCCCACTCAAGACGTCCTCTCCATGCTGGGCGACATCCGCAGGAGCCTGCTGGAGATTGGCATCCAGAACTACTCCACCACCAGCAGCTGCCAGGCCCGGGCCAGCCAGGTACGCAGCGACTACGGGACGCTCTTTGTGGTGCTGGTGGTCATCGGTGCCATCTGCGTCGTCATCATCGTGCTCGGCCTGCTCTATAACTGCTGGCAGCGCCGGCTGCCCAAGCTGAAACACGTGTCGCACGGCGAGGAGCTGCGCTTCGTGGAGAACGGCTGCCACGACAACCCCACGCTGGACGTGGCCAGCGACAGCCAGTCGGAGATGCAGGAGAAGCAGCCCAGCCTGAACGGCGGCGGCGCCGTCAACGGCCCGGGGGGCTGGAGCGCGCTCATGGGGGGCAAGCGCGACCCCGAGGACTCG

Related Sequences

bmy_17086T0 Protein

Length: 459 aa      View alignments
>bmy_17086T0
YGFPDLTEKAGPIEDTGQSQEGASLPSPLPKMSLVEPPWHVVPGEEEEEEQLLPVTRSQEESQSQVHGFPPTGSSQTPGAPEHRHEESGDQASSGVEVGSNMEPSLSPPTVTPSPVTPGGQDVADWGPGGTALPAAGHGLELEAPREPSEEATAGTAGLAGRPGEGPSPASFPQTEAPSGAEASDEDPTHPGASASFSLAPGDMELTPSSAAVGRETLSQLPQEGQTADAPSRTPWXSTQVICKDWSNLAGKNYIILTMAENVDCEVFRRHRGLQLLALVEGVLPRHGSGRHGDWHISLSKPSEKEQRLLMALVGEQGVVPTQDVLSMLGDIRRSLLEIGIQNYSTTSSCQARASQVRSDYGTLFVVLVVIGAICVVIIVLGLLYNCWQRRLPKLKHVSHGEELRFVENGCHDNPTLDVASDSQSEMQEKQPSLNGGGAVNGPGGWSALMGGKRDPEDS