Part of scaffold_1422 (Scaffold)

For more information consult the page for scaffold_1422 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

APC ENSTTRG00000001688 (Bottlenosed dolphin)

Gene Details

adenomatous polyposis coli

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001593, Bottlenosed dolphin)

Protein Percentage 97.9%
cDNA percentage 98.12%
Ka/Ks Ratio 0.1888 (Ka = 0.0076, Ks = 0.0402)

BT.25770 ENSBTAG00000018852 (Cow)

Gene Details

adenomatous polyposis coli protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025099, Cow)

Protein Percentage 96.22%
cDNA percentage 94.43%
Ka/Ks Ratio 0.08253 (Ka = 0.0173, Ks = 0.2096)

APC  (Minke Whale)

Gene Details

adenomatous polyposis coli

External Links

Gene match (Identifier: BACU014967, Minke Whale)

Protein Percentage 99.16%
cDNA percentage 99.18%
Ka/Ks Ratio 0.14925 (Ka = 0.0037, Ks = 0.0246)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 6429 bp    Location:198429..222647   Strand:+
>bmy_17089
ATGCTCAAGAACCTCATTCATTCAAAGCACAAGATGATTGCTATGGGAAGTGCTGCAGCTTTAAGGAATCTCATGGCAAATAGACCTGCAAAGTATAAGGATGCCAATATCATGTCTCCTGGTTCAAGCTTGCCTTCTCTTCATGTCAGGAAACAAAAAGCCCTAGAAGCAGAATTAGATGCTCAGCATTTATCAGAAACTTTTGACAATATTGACAATTTAAGTCCCAAGGCATCTCATCGTAGTAAGCAGAGACACAAGCAAAATCTCTATGGTGACTATGTTTTTGACACCAATCGACATGATGATAATAGGTCAGACAATTTTAATACTGGAAACATGACTGTCCTGTCACCATATTTAAACACTACAGTGTTGCCCAGCTCCTCTTCATCAAGGGGAAGTTTAGATAGTTCTCGTTCTGAGAAAGATAGAAGTTTGGAGAGAGAACGAGGTATTAGCCTAGTGAACTACCACCCAGCAACAGAAAATCCAGGAACCTCTTCGAAGCGAGGTTTGCAGATTTCTACCACTGCAGCCCAGATTGCCAAAGTCATGGAAGAAGTATCAGCCATTCATACCTCCCAGGAAGACAGAAGTTCTGGGTCTACCCCGGAACTACATTGTGGGACAGATGAGAGGAATGCACTAAGAAGAAGCTCTACCGCCCACACACATGCAAACTCTTACAACTTCACCAAGTCAGAAAACTCAAACAGGACATGTCCAGTGCCATATGCCAAAGTAGAATACAAGAGATCTTCAAATGATAGTTTAAATAGTGTCAGCAGTAGTGATGGTTATGGTAAAAGAGGTCAAATGAAACCTTCAGTTGAATCCTATTCTGAAGATGACGAAAGTAAATTTTGCAGCTATGGTCAGTATCCAGCTGACCTAGCCCATAAAATACATAGTGCAAATCATATGGATGATAATGATGGAGAACTAGATACACCAATAAATTATAGTCTTAAATATTCTGATGAACAGTTGAACTCCGGAAGGCAAAGTCCTTCACAGAATGAAAGATGGGCAAGACCCAAACATATAATAGAAGATGAAATAAAACAAAATGAGCAAAGACAATCAAGGAGTCAAAGCACAACTTATCCTGTATATCCTGAGAGCACTGATGATAAACACCTCAAGTTCCAACCACATTTTGGACAGCAAGAATGTGTTTCCCCATATAGGTCAAGAGCAGCCAATGGTTCAGAAACAAATCGAGTAGGTTCTAATCATGGAATTAATCAAAATGTAAATCAGTCTTTGTGTCAGGAAGATGACTATGAAGATGATAAGCCAACCAACTATAGTGAACGTTACTCTGAGGAAGAGCAACATGAGGAAGAAGAGAGACCAACCAATTATAGCATAAAATATAATGAAGAAAAACATCATGTGGATCAGCCTATTGATTATAGTTTAAAATATACCACAGACATTCCTTCTTCACAGAAACCAGCATTTTCATTCTCAAAGAATTCATCTGGACAAAGCACTAAAACTGAACACATATCTTCAAGCAGTGAGAATACATCCACACCTTCATCTAATGCCAAGAGGCAGAATCAGCTCCATCCAAGTTCAGCACAGAGCAGAAGTGGTCAGACCCAAAAAGCCACCTCTTCCTCTTGCAAAGTTCCCTCTATCAACCAAGAAACAATACAGACTTACTGTGTAGAAGATACCCCAATATGTTTTTCAAGATGTAGTTCATTATCATCTTTGTCATCAGCTGAAGATGAAATAGGGTGTGATCAGACAACACAAGAAGCAGATTCTGCTAATACCCTACAAATAGCAGAAATAAAAGAAAACAGTGGAACTAGATCAACTGAAGATTCTGTGAGTGAAGTTCCAACAGTGTCACAGCACATTAGAACCAAATCCAGCAGACTCCAGGCTTCTGGTTTATCTTCAGAATCAACCAGGCACAAAGCTGTTGAATTTTCTTCAGGGGCCAAATCTCCATCAAAGAGTGGTGCTCAGACACCTAAAAGTCCACCAGAGCACTACGTTCAGGAGACTCCACTCATGTTTAGCAGATGTACTTCTGTCAGTTCACTTGATAGTTTTGAGAGTCGTTCGATTGCCAGCTCCGTTCAGAGTGAACCCTGCAGTGGAATGGTGAGTGGCATTATAAGCCCCAGTGACCTTCCAGATAGCCCTGGACAAACCATGCCACCAAGCAGAAGTAAAACCCCTCCTCCCCCTCCTCCTCAAACAGCTCAGACTAAGCAAGAAGTACCTAAAAATAAAGCACCTAGTGCTGAGAAGAGAGAAAGTGGCCCTAAGCAAGCTGCTGTAAATGCTGCAGTACAGAGGGTCCAGGTTCTTCCAGATGCTGATACTTTGTTACATTTTGCCACAGAAAGTACTCCTGATGGATTTTCTTGTTCATCTAGCCTGAGTGCTCTGAGCCTCGATGAGCCATTTATTCAGAAAGATGTGGAATTAAGAATAATGCCTCCAGTTCAGGAAAATGACAATGGGAATGAAACAGAAAATGAGCAGCCTGAAGAATCAAATGAAAACCAGGAAAAAGAGGCAGAAAAACCCACTGATTCTGAAAAAGATCTATTAGATGATTCAGATGATGATGATATTGAAATACTAGAAGAGTGTATTATTTCTGCCATGCCAACAAAATCTTCACGCAAAGCCAAAAAGCCAGCCCAGACTTCTTCCAAATTACCTCCACCTGTGGCAAGGAAACCAAGTCAACTGCCTGTGTACAAACTTCTGCCATCACAAAACAGATTACAAGCACAAAAGCATGTTAGTTTTACACCAGGAGATGATATGCCTCGGGTGTATTGTGTAGAAGGGACACCTATAAACTTTTCCACAGCTACATCTCTAAGTGATCTAACAATAGAATCCCCTCCAAATGAGTTAGCTGCTGGAGAAGGTGTTAGAGCAGGAACACAGTCATGTGAATTTGAAAAACGAGACACCATTCCTACAGAAGGCAGAAGTACAGATGAGGCTCAAACAGGGAAAGCCTCATCTGTAGCTATACCTGAACTGGATGACAATAAAACAGAAGAAGGCGATATTCTTGCAGAATGCATTAATTCTGCTATGCCCAAAGGAAAAAGTCACAAGCCTTTCCGTGTGAAAAAGATAATGGACCAGGTCCAACAAGCATCTATGTCTTCATCTGGAACTAACAAAAATCAATTAGACGGTAAGAAAAAGAAACCTACTTCACCAGTAAAACCTATACCACAAAATACTGAATACAGGACACGTGTAAGAAAAAATACAGACTCAAAAAATAATTTAAATGCTGAAAGAAATTTCTCAGACAACAAAGATTCAAAGAAACAGAACTTGAAAAATAGTTCCAAGGACTTCAATGATAAGGTCCCAAATAATGAAGATCGAGTCAGAGGAAGCTTTACTTTTGATTCACCTCATCATTACACACCTATTGAAGGCACTCCATACTGTTTTTCACGAAATGATTCTTTGAGTTCTCTAGATTTTGATGATGATGATGTCGACCTTTCCAGGGAAAAGGCTGAATTAAGAAAGGGGAAGGAAAATAAGGAATCAGAAGCTAAAGTTACCAACCACACAGAACTAACCTCAAACCAACAATCAGCTAATAAGACACAAGCTGTTCCAAAACATCCAGTAAATCGAGGTCAGCCTAAACCCGTGCTGCAGAAGCAATCCACTTTTCCCCAGTCCTCCAAAGATATACCAGACAGAGGGGCAGCAACAGATGAGAAATTACAGAATTTTGCTATTGAAAATACTCCGGTTTGCTTTTCCCGAAATTCCTCTCTAAGTTCTCTTAGTGACATTGATCAAGAAAACAACAACAACAAGGAAAATGAACCTATCAAAGAGACAGCGCCCCCTGACTCACAGGGAGAACCAAGTAAACCTCAGGCGTCAGGTTATGCTCCTAAATCATTTCACGTTGAAGATACCCCTGTTTGTTTCTCAAGAAACAGTTCTCTCAGTTCTCTCAGTATTGATTCTGAAGATGACCTGTTGCAGGAATGTATAAGTTCTGCAATGCCAAAAAAGAAAAAGCCTTCAAGACTCAAGGCTGATAATGAAAAGCATAGTCCCAGAAATATGGGTGGCATGTTAGCAGAAGATTTGACACTCGATTTGAAAGATATACAGAGACCAGATTCAGAACATGGTTTATCCCCTGATTCAGAAAATTTCGATTGGAAAGCTATTCAGGAAGGTGCAAATTCCATAGTAAGTAGTTTACATCAAGCTGCTGCCGCCGCATGTTTATCTAGACAAGCTTCGTCTGATTCAGATTCCATCCTTTCCCTGAAATCAGGAATCTCTTTGGGATCACCATTTCATCTTACACCTGATCAAGAGGAAAAACCCTTTGCAAGTAATAAAGGCCCACGAATTCTAAAACCTGGGGAGAAAAGTACATTGGAAACTAAGAAGTTAGAGTCTGAAAATAAAGGAATAAAAGGAGGGAAAAAAGTTTATAAAAGTTTGATTACTGGAAAAGTTCGATCTAATTCAGAAGTTTCAAGCCAAATGAAACAACCCCTTCAAACAAACATGCCTTCAATCTCTCGAGGTAGGACAATGATTCACATTCCAGGAGTTCGGAATAGCTCTTCAAGTACAAGTCCGGTTTCTAAAAAAGGCCCACCCCTTAAGACTCCAGCCTCCAAAAGCCCTAGTGAAGGTCAGGCAGCTACCACTTCCCCCAGAGGAGCCAAGCCATCAGTGAAGTCAGAATTAAGCCCCGTTACGAGGCAGGCATCCCAGACACCTGGGTCAAATAAAGGGCCTTCTAGATCAGGATCTAGAGATTCCACTCCTTCAAGACCTGCCCAGCAGCCATTAAGTAGACCTATGCAGTCTCCAGGGCGAAACTCAATTTCTCCTGGTAGAAATGGAATAAGTCCTCCTAACAAATTATCTCAACTGCCAAGGACGTCATCCCCTAGTACTGCTTCAACTAAGTCTTCGGGTTCTGGGAAAATGTCTTACACATCTCCTGGCAGACAGATGAGCCAACAGAACCTCACCAAACAAACGGGTTTATCCAAGAATGTCAGTAGTATCCCAAGAAGTGAATCTGCCTCCAAAGGACTAAATCAAATGAGTACTAGCAATGGAGCCAATAAAAAGGTAGAACTTTCTAGAATGTCTTCAACTAAATCAAGTGGAAGTGAATCTGATAGGTCAGAGAGACCTGTATTAGTACGCCAGTCAACTTTCATCAAAGAAGCTCCAAGCCCAACCCTAAGGAGAAAATTGGAGGAATCTGCTTCATTTGAATCTCTTTCTCCATCTTCTAGACCAGATTCTCCCACTAGGTCCCAGGCACAGACTCCAATTTTAAGTCCTTCCCTTCCTGATATGTCTCTGTCTACACATTCGTCTGTTCAGGCTGGTGGATGGCGAAAACTCCCACCTAATCTCAGTCCCACCATAGAGTATAATGATGGAAGACCAGTAAAGCGCCATGATATAGCACGCTCTCATTCCGAAAGTCCTTCCAGACTTCCCATCAATAGGTCAGGAACCTGGAAACGTGAGCACAGCAAACACTCATCATCCCTTCCCCGAGTAAGCACTTGGAGGAGAACCGGAAGTTCATCCTCAATTCTTTCTGCTTCATCAGAATCTAGTGAAAAAGCAAAAAGTGAAGATGAAAAACATGTGAACTCTATTTCAGGAACCAAACAAACTAAAGAAAACCAAGTATCCACGAAAGGAACATGGAGAAAAATAAAAGAAAGTGAAATTTCTCCCACCAGTAGTACTTCTCAGACCACTTCCTCAGGTGCTGCAAATGGTGCTGAATCAAAGACTCTGATTTATCAAATGGCACCTGCTGTTTCTAAAACAGAGGATGTTTGGGTGAGAATTGAGGACTGTCCCATTAACAACCCTAGATCTGGAAGATCTCCAACAGGAAATACTCCCCCAGTGATTGACACTGTTTCAGAAAAGGGAAACCCAAACACTAAAGATTCAAAAGATAATCAGGGAAAACAAAATGTGAGCAACGGTAGTGCTCCTGTACGCACCATGGGTTTGGAAAACCGCATGAACTCCTTTATTCAGGTAGATGCCCCAGACCAAAAAGGAACTGAGGCAAAACCGGGACAAAGTAATCCTGTCCCTGCATCAGAGACTAATGAAAGTTCTATAGCTGAACGTACCCCATTTAGTTCTAGCAGCTCAAGCAAGCACAGTTCACCGAGTGGGACTGTTGCTGCCAGAGTGAGTCCTTTTAATTACAACCCAAGCCCAAGGAAAAGCAGCGCAGATAGCACTTCAGCCCGACCATCTCAGATCCCAACACCAGTGAATAACAACACAAAGAAAAGAGATTCAAAAACTGACAATACAGAATCCAGTGGAACTCAAAGTCCTAAACGCCATTCTGGGTCTTACCTTGTGACATCTGTTTAA

Related Sequences

bmy_17089T0 Protein

Length: 2143 aa      View alignments
>bmy_17089T0
MLKNLIHSKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSETFDNIDNLSPKASHRSKQRHKQNLYGDYVFDTNRHDDNRSDNFNTGNMTVLSPYLNTTVLPSSSSSRGSLDSSRSEKDRSLERERGISLVNYHPATENPGTSSKRGLQISTTAAQIAKVMEEVSAIHTSQEDRSSGSTPELHCGTDERNALRRSSTAHTHANSYNFTKSENSNRTCPVPYAKVEYKRSSNDSLNSVSSSDGYGKRGQMKPSVESYSEDDESKFCSYGQYPADLAHKIHSANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHIIEDEIKQNEQRQSRSQSTTYPVYPESTDDKHLKFQPHFGQQECVSPYRSRAANGSETNRVGSNHGINQNVNQSLCQEDDYEDDKPTNYSERYSEEEQHEEEERPTNYSIKYNEEKHHVDQPIDYSLKYTTDIPSSQKPAFSFSKNSSGQSTKTEHISSSSENTSTPSSNAKRQNQLHPSSAQSRSGQTQKATSSSCKVPSINQETIQTYCVEDTPICFSRCSSLSSLSSAEDEIGCDQTTQEADSANTLQIAEIKENSGTRSTEDSVSEVPTVSQHIRTKSSRLQASGLSSESTRHKAVEFSSGAKSPSKSGAQTPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSEPCSGMVSGIISPSDLPDSPGQTMPPSRSKTPPPPPPQTAQTKQEVPKNKAPSAEKRESGPKQAAVNAAVQRVQVLPDADTLLHFATESTPDGFSCSSSLSALSLDEPFIQKDVELRIMPPVQENDNGNETENEQPEESNENQEKEAEKPTDSEKDLLDDSDDDDIEILEECIISAMPTKSSRKAKKPAQTSSKLPPPVARKPSQLPVYKLLPSQNRLQAQKHVSFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPNELAAGEGVRAGTQSCEFEKRDTIPTEGRSTDEAQTGKASSVAIPELDDNKTEEGDILAECINSAMPKGKSHKPFRVKKIMDQVQQASMSSSGTNKNQLDGKKKKPTSPVKPIPQNTEYRTRVRKNTDSKNNLNAERNFSDNKDSKKQNLKNSSKDFNDKVPNNEDRVRGSFTFDSPHHYTPIEGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKGKENKESEAKVTNHTELTSNQQSANKTQAVPKHPVNRGQPKPVLQKQSTFPQSSKDIPDRGAATDEKLQNFAIENTPVCFSRNSSLSSLSDIDQENNNNKENEPIKETAPPDSQGEPSKPQASGYAPKSFHVEDTPVCFSRNSSLSSLSIDSEDDLLQECISSAMPKKKKPSRLKADNEKHSPRNMGGMLAEDLTLDLKDIQRPDSEHGLSPDSENFDWKAIQEGANSIVSSLHQAAAAACLSRQASSDSDSILSLKSGISLGSPFHLTPDQEEKPFASNKGPRILKPGEKSTLETKKLESENKGIKGGKKVYKSLITGKVRSNSEVSSQMKQPLQTNMPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPLKTPASKSPSEGQAATTSPRGAKPSVKSELSPVTRQASQTPGSNKGPSRSGSRDSTPSRPAQQPLSRPMQSPGRNSISPGRNGISPPNKLSQLPRTSSPSTASTKSSGSGKMSYTSPGRQMSQQNLTKQTGLSKNVSSIPRSESASKGLNQMSTSNGANKKVELSRMSSTKSSGSESDRSERPVLVRQSTFIKEAPSPTLRRKLEESASFESLSPSSRPDSPTRSQAQTPILSPSLPDMSLSTHSSVQAGGWRKLPPNLSPTIEYNDGRPVKRHDIARSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILSASSESSEKAKSEDEKHVNSISGTKQTKENQVSTKGTWRKIKESEISPTSSTSQTTSSGAANGAESKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDTVSEKGNPNTKDSKDNQGKQNVSNGSAPVRTMGLENRMNSFIQVDAPDQKGTEAKPGQSNPVPASETNESSIAERTPFSSSSSSKHSSPSGTVAARVSPFNYNPSPRKSSADSTSARPSQIPTPVNNNTKKRDSKTDNTESSGTQSPKRHSGSYLVTSV*