Part of scaffold_1430 (Scaffold)

For more information consult the page for scaffold_1430 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHSY1 ENSTTRG00000002581 (Bottlenosed dolphin)

Gene Details

chondroitin sulfate synthase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002421, Bottlenosed dolphin)

Protein Percentage 98.89%
cDNA percentage 98.77%
Ka/Ks Ratio 0.17878 (Ka = 0.0054, Ks = 0.0299)

BT.17704 ENSBTAG00000007357 (Cow)

Gene Details

chondroitin sulfate synthase 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009678, Cow)

Protein Percentage 98.28%
cDNA percentage 95.89%
Ka/Ks Ratio 0.05294 (Ka = 0.008, Ks = 0.1505)

CHSY1  (Minke Whale)

Gene Details

chondroitin sulfate synthase 1

External Links

Gene match (Identifier: BACU007876, Minke Whale)

Protein Percentage 99.71%
cDNA percentage 99.31%
Ka/Ks Ratio 0.07164 (Ka = 0.0014, Ks = 0.02)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location:346692..345472   Strand:-
>bmy_17109
ATGGACTCCGCGCAGAGGGAGGCCTTGGATGATATTGTCATGCAGGTCATGGAAATGATCAATGCCAACGCCAAGACCAGAGGGCGCATTATTGATTTTAAGGAGGTACAGTACGGCTATCGCCGAGTGAATCCCATGTACGGGGCCGAGTACATTCTGGACCTGCTGCTTCTGTACAAAAAACACAAAGGAAAGAAAATGACGGTGCCTGTGCGGAGGCATGCGTATTTACAGCAGACCTTCAGCAAGATCCAGTTTGTGGAACACGAGGAGCTGGATGCAAAGGAACTGGCCAAAAAAATCAATCAAGAATCCGGATCCTTGTCCTTTCTCTCGAATTCCCTGAAGAAGCTTGTTCCCTTTCAGCTCCCTGGGTCCAAGGATGAGCACAAAGAACCCAAAGAGAAAAAGATCAATATATTGATTCCTTTGTCTGGACGTTTTGACATGTTTGTGAGATTCATGGGGAACTTTGAGAAGACGTGTCTCATTCCGAATCAGAATGTCAGGCTCGTTGTTCTACTCTTCAATTCTGACTCCAACCCCGACAAGGCCAAGCAAGTTGAACTCATGAGAGATTACCGCATTAAGTACCCGAAAGCTGACATGCAGATTTTGCCCGTGTCTGGAGAATTTTCAAGAGCTCTGGCCCTAGAAGTGGGATCTTCCCAATTTAATAATGAATCTTTGCTCTTCTTCTGTGACGTTGACCTTGTATTTACTACAGAATTTCTTCAGCGATGTCGAGCAAATACAGTTCTGGGCCAACAAATATATTTTCCCATCATCTTTAGCCAGTACGATCCTAAGATTGTTTATAGTGGGAAGGTTCCCAGTGACAACCATTTTGCCTTTACTCAAAAAACTGGCTTCTGGAGAAACTATGGGTTTGGCATTACTTGTATTTATAAGGGAGATCTCGTCCAAGTAGGTGGCTTTGATGTTTCTATCCAAGGCTGGGGGCTCGAGGATGTCGACCTTTTCAACAAGGTTGTCCAGGCAGGTTTGAAGACATTTAGGAGCCAAGAAGTAGGAGTAGTCCACGTCCACCATCCTGTCTTTTGTGATCCCAACCTTGATCCCAAACAGTACAAAATGTGCTTGGGGTCCAAAGCATCAACATATGGGTCCACACAGCAGTTGGCTGAAATGTGGCTAGAAAAAAATGACCCAAATTACAGTAAAAGCAGCAATAATAATGGTTCAGTGAGGACAGCCTAA

Related Sequences

bmy_17109T0 Protein

Length: 407 aa      View alignments
>bmy_17109T0
MDSAQREALDDIVMQVMEMINANAKTRGRIIDFKEVQYGYRRVNPMYGAEYILDLLLLYKKHKGKKMTVPVRRHAYLQQTFSKIQFVEHEELDAKELAKKINQESGSLSFLSNSLKKLVPFQLPGSKDEHKEPKEKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVRLVVLLFNSDSNPDKAKQVELMRDYRIKYPKADMQILPVSGEFSRALALEVGSSQFNNESLLFFCDVDLVFTTEFLQRCRANTVLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVQVGGFDVSIQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHHPVFCDPNLDPKQYKMCLGSKASTYGSTQQLAEMWLEKNDPNYSKSSNNNGSVRTA*