Part of scaffold_1459 (Scaffold)

For more information consult the page for scaffold_1459 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNX8 ENSTTRG00000010695 (Bottlenosed dolphin)

Gene Details

sorting nexin 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010143, Bottlenosed dolphin)

Protein Percentage 89.09%
cDNA percentage 88.24%
Ka/Ks Ratio 0.08973 (Ka = 0.0121, Ks = 0.1345)

SNX8 ENSBTAG00000013708 (Cow)

Gene Details

Sorting nexin-8

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018213, Cow)

Protein Percentage 89.17%
cDNA percentage 85.8%
Ka/Ks Ratio 0.07624 (Ka = 0.0644, Ks = 0.8443)

SNX8  (Minke Whale)

Gene Details

sorting nexin 8

External Links

Gene match (Identifier: BACU005495, Minke Whale)

Protein Percentage 92.06%
cDNA percentage 93.02%
Ka/Ks Ratio 0.29442 (Ka = 0.0509, Ks = 0.173)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 834 bp    Location:32135..18802   Strand:-
>bmy_17113
ATGCAGATGCCGCCGGGGAACCCGCTGCTGTTGTCACTCACGCTGCCGGAGCTGCTGGCCAGGGACGCCGTGCAGGTGGAGCTCATCCCCGAGAAGAAGGGCCTCTTCCTCAAGCACGTGGAGTATGAGGTTTCCAGCCAGCGCTTCAAGTCCTGCGTGTATCGACGGTACAATGACTTCGTGGTCTTCCACGAGGCGCTGCTGCAGAAGTTCCCGTACCGCATGGTGCCGGCCCTCCCGCCCAAGAGGATGCTGGGAGCTGACAGGGAATTCATCGAGGCCCGGAGGAGAGCACTGAAGCGCTTCATCAACCTGGTGGCCCGGCACCCGCCCTTCTCCGAGGACGTTGTTCTCAAGCTGTTCCTGTCCTTCAGTGGCCCCGATGTGCAGAACAAGTTAAAGGAATCCGCTCAGTGTGTGGGAGACGAGTTCATGAATTGTAAGCTGGCTGCTCGGGCCAAGGACTTCCTCCCAGCCGACATCCAGACTCAATTCGCCATCAGCCGGGAGCTGATTCGCAACATCTACAACAGCTTCCACAAGCTTCGCGATAGGGCCGAGCGGATGGTGTCGCGGGCCATCGACAATGCTGCTGACCTTCTCATATTCGGGAAGGAACTGAGTGCTTTAGGGTCTGACACGACCCCGCTCCCCTCCTGGGCCACTCTGAACAGTAGCATGTGGGGGTCCCTCAAACAGGCGCTGAAAGGCCTGTCCGTTGAATTTGCACTGCTCGCTGACAAGGCTGCACAGCAGGTGAGTGGGTTTGTTCTCCGAGGTGCTTGTTCCGGAGAACATTCTATGCCGTGGTGTGCGGGAGCGTCTTCTTCTTAG

Related Sequences

bmy_17113T0 Protein

Length: 278 aa      View alignments
>bmy_17113T0
MQMPPGNPLLLSLTLPELLARDAVQVELIPEKKGLFLKHVEYEVSSQRFKSCVYRRYNDFVVFHEALLQKFPYRMVPALPPKRMLGADREFIEARRRALKRFINLVARHPPFSEDVVLKLFLSFSGPDVQNKLKESAQCVGDEFMNCKLAARAKDFLPADIQTQFAISRELIRNIYNSFHKLRDRAERMVSRAIDNAADLLIFGKELSALGSDTTPLPSWATLNSSMWGSLKQALKGLSVEFALLADKAAQQVSGFVLRGACSGEHSMPWCAGASSS*