Sequence detailsbmy_17116 (Coding sequence)

Part of scaffold_1459 (SequenceType object (1))

For more information consult the page for scaffold_1459 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHST12ENSTTRG00000010636 (Bottlenosed dolphin)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 12

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010080, Bottlenosed dolphin)

Protein Percentage 96.12%
cDNA percentage 96.68%
Ka/Ks Ratio 0.11746 (Ka = 0.0161, Ks = 0.1368)

BT.32313ENSBTAG00000020898 (Cow)

Gene Details

carbohydrate sulfotransferase 12

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027841, Cow)

Protein Percentage 89.42%
cDNA percentage 91.11%
Ka/Ks Ratio 0.11317 (Ka = 0.0521, Ks = 0.4606)

Additional orthologs identified in other species via the OPTIC pipeline.

CHST12 (Human)   Chst12 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1395 bp    Location:185846..188418   Strand:+
Raw sequence 
>bmy_17116
ATGGCCGACAGCCCTGAGTGGGTGAGAGGAGGTGTGATCGCCGCCCCTCAGGCTTCCTCGGAGGGCAGCGTCCGGTCTCTACAGGAAGCTGAAGTGAAAGGATCCGGGGAGGAGGCCCCCGCATCCATGGACACAATGACCAAAAGTCGGTTCTTCCGCCTGTGGCTGGTCTTGGGGTCCGTCTTCATGATCCTCCTGATCATCGTGTACTGGGACAACATGGGCACCGCCCACTTCTACCTGCACACTTCCCTCTCCAGGCCTCATATCCTGGAGCCCTTCCCCAGCCCCAAGCCAGGGAATGAGAAGTATTTCACCGCCAGCATTGAGGAGATTTTGGAGAAGCTCCTCAGTGCTCATGCGAAGCAGAACGTCCTTCTGGGTAAAAAGGTGGAGCAGCCCTCCCTGCTGGCCTCCAGCAAGCCTGTGCTCAGCAACATGGAAGAGAGCGTGCGGGGCTACGACTGGTCCAGCCACGACGCCCAGCAGACCCCGGACCCGGACAGGCGGCAGGCYGAACGGAGGAGCGTGCTGAGGGGGTTCTGCGCCAACGCCAGCTTTGTGTTCCCCACCAAGGAGCGCTCTTTCGATGACATTCCCAACTACGAGCTGAACCACCTCATCGTGGACGACCGCCACGGGGTCATCTACTGCTACGTGCCCAAGGTGGCCTGCACCAACTGGAAGCGCGTGATGATCGTCCTGAGCCAGAGCCTCTCGGACCAGGGCACGCCCTACCGTGACCCCCTGGACATCCCCCGGGAGTACGTCCACAACTCCAGCACCCACCTGACTTTCAACAAGTTCTGGCGCCGCTACGGGAAGTTCTCCCGCCACCTCATGAAGGTTAAACTGAAAAAGTACACCAAGTTCCTGTTCGTGCGGGACCCCTTCGTCCGCCTCATCTCGGCCTTCCGCAGCAAGTTCGAGCTGGAGAACGAAGAGTTCTACCAGAAGTTCGCCATCCCCATGCTGAAGATGTACTCCAACCACACCAGCCTGCCCAAGTCGGTCAGCGAGGCCTTCAGTGCAGGCCTCAAGGTGTCCTTCGCCAACTTCATCCAGTACCTGCTGGACCCTCACACCGAGAAGCTGGCGCCCTTCAACGAGCACTGGAGGCAGGTGCACCGCCTCTGCCACCCCTGCCAGATAGACTATGACTTCGTGGGGAAACTGGAGACCCTGGACCAGGATGCCACCCAGCTGCTCCGGCTTCTCAAGGTGGACAAGCTGCTTCAGTTCCCCCCGAGTTACCGGAACAGAACTGCCAGCAGCTGGGAGGAAGGCTGGTTCGCCAAAATTCCGCTGGCCTGGAGGCAGCAGCTTTACAAACTCTACGAAGCAGATTTTGTCCTCTTTGGCTACCCCAAGCCTGAACATCTACTTAGAGACTGA

Related Sequences

bmy_17116T0 SequenceType object (3)

Length: 465 aa      View alignments
>bmy_17116T0
MADSPEWVRGGVIAAPQASSEGSVRSLQEAEVKGSGEEAPASMDTMTKSRFFRLWLVLGSVFMILLIIVYWDNMGTAHFYLHTSLSRPHILEPFPSPKPGNEKYFTASIEEILEKLLSAHAKQNVLLGKKVEQPSLLASSKPVLSNMEESVRGYDWSSHDAQQTPDPDRRQAERRSVLRGFCANASFVFPTKERSFDDIPNYELNHLIVDDRHGVIYCYVPKVACTNWKRVMIVLSQSLSDQGTPYRDPLDIPREYVHNSSTHLTFNKFWRRYGKFSRHLMKVKLKKYTKFLFVRDPFVRLISAFRSKFELENEEFYQKFAIPMLKMYSNHTSLPKSVSEAFSAGLKVSFANFIQYLLDPHTEKLAPFNEHWRQVHRLCHPCQIDYDFVGKLETLDQDATQLLRLLKVDKLLQFPPSYRNRTASSWEEGWFAKIPLAWRQQLYKLYEADFVLFGYPKPEHLLRD*