Part of scaffold_1459 (Scaffold)

For more information consult the page for scaffold_1459 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LFNG ENSBTAG00000040361 (Cow)

Gene Details

Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000052963, Cow)

Protein Percentage 93.39%
cDNA percentage 91.71%
Ka/Ks Ratio 0.05187 (Ka = 0.0277, Ks = 0.534)

LFNG  (Minke Whale)

Gene Details

LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase

External Links

Gene match (Identifier: BACU005500, Minke Whale)

Protein Percentage 98.96%
cDNA percentage 98.15%
Ka/Ks Ratio 0.03362 (Ka = 0.0041, Ks = 0.121)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1137 bp    Location:254273..263232   Strand:+
>bmy_17118
ATGCTCAAGCGCTGCGGCCGCCGCCTGCTGCTGGCGCTGGCGGGCGCGCTGCTCGCCTGCCTGCTGGTGCTCACCGCCGACCCGCCGCCGCCCCCGGTGCCCGCTGAGCGTGGTCGGCGCGCGCTGCGCAGCCTGGCGGGCCCCTCGGGGGCGGCCCCAGCTCCTGGGCTGGAGGCGGCGGCGGCACCCGGGGCGCTAGTCCGCGAGGTGCACAGTCTGTCCGAGTACTTCAGCCTGCTGACCCGCTCTCGTAGAGACGCGGGCCCACCGCCCGGCAGCGTCCCCCGCCCCGCAGACGGCCATCCGCGGCCCCCGGCCGAGCCACTCACGCCGCACGACGTCTTCATCGCGGTCAAGACCACCAAAAAGTTTCACCGCGCGCGCCTCGACTTGCTGCTGGAGACGTGGATCTCGCGCCACAAGGAGATGACGTACATTTTCACAGACGGGGAAGATGAAGCCCTGGCCAGGCGCATGGGCAACGTGGTCAATACTAACTGCTCGGCTGCCCACAGCCGCCAGGCGCTGTCCTGCAAGATGGCCGTGGAGTATGACCGCTTCATCGAATCGGGGAGGAAGTGGTTCTGCCATGTGGATGACGATAACTACGTGAACGTGCGGGCCTTGCTGCGGCTGCTGGCCAGCTACCCGCACACGCAGGATGTCTACCTCGGCAAGCCCAGCCTGGACAGGCCCATCCAGGCCACAGAGAGGGTCGGCGAGAGCAAGGTGCGTCCCGTCCACTTCTGGTTTGCCACCGGCGGGGCTGGCTTCTGCATCAGCCGAGGGCTGGCCCTGAAGATGAGCCCTTGGGCCAGCGGAGGCCACTTCATGAGCACGGCCGAGCGGATCCGGCTGCCGGACGACTGCACCATCGGCTACATCGTGGAGGCTCTGCTGGGCGTGCCCCTCATCCGCAGCGGGCTCTTCCACTCCCACCTGGAGAACCTGCAGCAGGTCCCCACCTCCGAGCTCCATGAGCAGGTGACCTTGAGCTACGGCATGTTTGAGAACAAGCGGAATGCTGTCCACATTAAGGGGCCCTTCTCAGTGGAGGCCGACCCGTCCAGGTTCCGCTCCATCCACTGCCACCTGTACCCGGACACACCCTGGTGTCCCCACACTGCCATCTTCTAG

Related Sequences

bmy_17118T0 Protein

Length: 379 aa      View alignments
>bmy_17118T0
MLKRCGRRLLLALAGALLACLLVLTADPPPPPVPAERGRRALRSLAGPSGAAPAPGLEAAAAPGALVREVHSLSEYFSLLTRSRRDAGPPPGSVPRPADGHPRPPAEPLTPHDVFIAVKTTKKFHRARLDLLLETWISRHKEMTYIFTDGEDEALARRMGNVVNTNCSAAHSRQALSCKMAVEYDRFIESGRKWFCHVDDDNYVNVRALLRLLASYPHTQDVYLGKPSLDRPIQATERVGESKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALLGVPLIRSGLFHSHLENLQQVPTSELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRSIHCHLYPDTPWCPHTAIF*