Sequence detailsbmy_17123 (Coding sequence)

Part of scaffold_1459 (SequenceType object (1))

For more information consult the page for scaffold_1459 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRAT1ENSTTRG00000009609 (Bottlenosed dolphin)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000009116, Bottlenosed dolphin)

Protein Percentage 81.94%
cDNA percentage 83.15%
Ka/Ks Ratio 0.31786 (Ka = 0.0301, Ks = 0.0947)

BRAT1ENSBTAG00000014502 (Cow)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000019280, Cow)

Protein Percentage 83.79%
cDNA percentage 87.14%
Ka/Ks Ratio 0.19171 (Ka = 0.0859, Ks = 0.4479)

BRAT1 (Minke Whale)

Gene Details

BRCA1-associated ATM activator 1

External Links

Gene match (Identifier: BACU005504, Minke Whale)

Protein Percentage 92.83%
cDNA percentage 94.17%
Ka/Ks Ratio 0.4522 (Ka = 0.0481, Ks = 0.1064)

Additional orthologs identified in other species via the OPTIC pipeline.

BRAT1 (Human)   Brat1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1341 bp    Location:354402..368058   Strand:+
Raw sequence 
>bmy_17123
ATGGACCCAGAGTGCTCCCGGCTCCTCCCTGCTCTCTGTGCCGTCCTGGCAGACCCCAGGCAGCCTGTGGCAGACGACACTTGTTTGGAGAAGCTGCTGGACTGGTTTACAACAGTAACCGAAGCAGGGTCCAGCCTCCTGTTACTACAGGAGAATCCCTGCCTGGTAGAGCTGCTGTTCCGCGTGCTGAAATCCCAGGACCTAAGTTCCAGAATCCTCTCCTTCTCACTCCGCCTCGCAGGGATATTTGCAGCCCAGGAAAACTGCTTCCAGTATCTTCAGGCGCTGAGGACCCAGGCCTTTGGCATCCTCCTCCAGCCCCTGGCCTGTGTCCTGGAAGCTGCTGCTCAGGCCCCTGGACCTCCAGAGCTGCTTCCTGTGCTACAGAAGCGCCTGTGCAGCCCCTGCTGGGAGGTGAGGGACTCGGGCCTCGAGTTCCTGACCCAAATGACCAGACACTGGGGAGGGCAGGCCGGCTTCAGACAAGCGCTCCTTGCTTCAGAGGTGCCCGAGCTCACCAAGCAGCTTCTGCGAGACCCTGAGAGTTACGTCCGCGCGAGCGCAGTGACCGCCACAGGGCAGCTGTCCAGCTGGGGGCTGCTTGCCGCCCCTGCCAGCCCTGAGCGCCCAGGGGCTCAGCAGGAGAGCCTGCTCCTGGCGCTTCTGCACATCCTCTCCGCGGACTCGGAGGGCTTCCCCCGGAGGGCCGTCATGCAGGTCTTCACCGAGTGGCTGAGGGATGGCCATGCTGACGTAGCTGAAGACCCGGAGCGGTTTGTGGCCCGAGTGCTGCAGGCGGCGAGCAGGGACCCGGACTGGGAGGTGCGGGCCCAGGGCCTCGAGCTGGCGCTGGTGTTCCTGGGGCGGCTGCTGGGCCCGCGCGGCTCCCACTGTCCCTGCGCCGTGGCCCTGCCCGAGGCAGCCCCGCCTGGCACGCTGGCCCAGGCCCTGCAGGTGCTCTGCCGTGTGCAGCTCTTTGAGTTTGCCTTCCGTGCCTTGTTTGACTGTGACCGACCTGTGGCCCAGAAGTCCTGTGATCTTCTCCTATTCCTGAGGGCCAAGGCTGCTCCCTGTGGCAGCCCGCAGGAGGCGGGGGACAGTCCCAACGTGGCCTCTGTGGAGGCCACCCTGCAGAGATGGCAGGCAGGTGAGCAGGGTCAGCCCCTGGGGTACCTGGAGCCTGGGGCCGTCATGGCTGTGCTGAGGTCTATAGACCTGGAGGGCCTTCGGGACACTCTGGCTGAGAGCAGTGACCACGTGGAGAAGAGCCCCCAGTCACTCCTGCAGGACATGCTGGCTGCCGTGGGCGTCCTCGGGGAGAACGAGGCCGACTGCTACTGA

Related Sequences

bmy_17123T0 SequenceType object (3)

Length: 447 aa      View alignments
>bmy_17123T0
MDPECSRLLPALCAVLADPRQPVADDTCLEKLLDWFTTVTEAGSSLLLLQENPCLVELLFRVLKSQDLSSRILSFSLRLAGIFAAQENCFQYLQALRTQAFGILLQPLACVLEAAAQAPGPPELLPVLQKRLCSPCWEVRDSGLEFLTQMTRHWGGQAGFRQALLASEVPELTKQLLRDPESYVRASAVTATGQLSSWGLLAAPASPERPGAQQESLLLALLHILSADSEGFPRRAVMQVFTEWLRDGHADVAEDPERFVARVLQAASRDPDWEVRAQGLELALVFLGRLLGPRGSHCPCAVALPEAAPPGTLAQALQVLCRVQLFEFAFRALFDCDRPVAQKSCDLLLFLRAKAAPCGSPQEAGDSPNVASVEATLQRWQAGEQGQPLGYLEPGAVMAVLRSIDLEGLRDTLAESSDHVEKSPQSLLQDMLAAVGVLGENEADCY*