Part of scaffold_1431 (Scaffold)

For more information consult the page for scaffold_1431 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC6L ENSTTRG00000010777 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010199, Bottlenosed dolphin)

Protein Percentage 96.39%
cDNA percentage 97.62%
Ka/Ks Ratio 0.55164 (Ka = 0.0202, Ks = 0.0367)

ERCC6L ENSBTAG00000005607 (Cow)

Gene Details

DNA excision repair protein ERCC-6-like

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007362, Cow)

Protein Percentage 90.18%
cDNA percentage 93.18%
Ka/Ks Ratio 0.3881 (Ka = 0.0525, Ks = 0.1353)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3756 bp    Location:262542..301563   Strand:+
>bmy_17130
ATGGCTCGCAATGATCCGGAAAACTTTGCAGCATCTAAGCCTGGCATTCCCTCTGTGGAGAGGAAATGCTTCGCAAGATACGTGAAAGAGGCCAAAGAAGCAACTAAGAATGGAGATCTGGAAGAAGCACTTAAACTTTTCAATTTGGCAAAGGACATTTTTCCCAATGAAAAGGTGATGAGCAGAATCCAAAAAATACAGGAAGCCTTGGAGGAGTTGGCAGAACATGGAGATGATGAATTCACAGATGTGTGCAACTCTGGCCTGCTGCTCTATCGAGAACTGCACAACCAACTATTTGAGTACCAGAAGGAAGGTGTAGCTTTCCTATATAGCCTGTATAGGGATGGAAGGAGAGGTGGTATTCTGGCAGATGATATGGGATTAGGAAAGACTGTTCAAATCATCGCTTTCCTTTCTGGTATGTTTGATGCTTCACTTGTGAACCATGTGCTACTGATCATGCCAACCAGTCTCATCAGCACATGGCTAAAAGAATTTGTCAAGTGGACCCCAGGAATGAGAGTCAAAACCTTTCACGGTCCTAGCAAGGATGAACGTACCAGAAACCTCAGTCGGATTCAGCAAAGGAATGGTGTCATTATCACCACATACCAAATGTTAATCAATAATTGGCAGCAACTTTCCAGCTTGAATGGCCAAGAGTTTGTGTGGGACTATGTCATCCTTGATGAAGCACATAAAATAAAAACCTCATCTACCAAGTCAGCAATATGTGCTCGTGCAATCCCTGCCAGTAATCGCATCCTCCTCACAGGAACCCCGATCCAGAATAATTTACAAGAACTGTGGTCCCTGTTTGATTTTGCTTGTCAAGGGTCCCTGCTAGGAACATTAAAAACTTTTAAAATGGAGTACGAAAATCCTATTACTAGAGCAAGAGAGAAGGATGCTACCCCAGGAGAAAAAGCCTTAGGATTTAAAATATCTGAAAACTTAATGGCAATCATAAAGCCCTATTTTCTTAGGAGGACTAAAGAAGAGGTACAGAAGAAAAAGTCAAGCAACCCAGAGGTCCAGCTTAGTGAAAAGAGTCCAGATGTTGGTGCCATATGTGAAATGCCTTCCCTTTCCAGAAAAAATGATTTAATTATTTGGATACGTCTTGTACCTTTACAGGAAGAAATATACAGGAAATTCGTGTCTCTAGATCATATCAAGGAGTTGTTAATGGAGACACGCTCACCTTTGGCTGAGCTAGGTGTCTTAAAGAAGCTCTGTGATCATCCTAGGCTGCTATCTGCACGGGCTTGTGGTTTGCTGAATCTAGGAGCTGTCAAATTCTCTGTTCAAGATGAAATTGAAGGGGAAGATTCCTCAGATGTGGACCATATTGATCAAATAAGTGATGATGCACTGATGGAAGAATCTGGAAAAATGATATTTCTAATGGGCCTGCTTAAGAGACTGCGAGATGAAGGGCATCAAACTCTGGTGTTTTGCCAGTCAAGACGAATTCTAAACATCATCGAACGCCTGTTAAAGAATAGGCACTTTAAGATATTGAGAATCGATGGAACAGTTACTCATCTTGTGGAACGAGAAAAAAGAATTAGCTTATTCCAGCAAAATAAAGATTACTCTGTTTTTCTGCTTACCACTCAAGTAGGTGGTGTTGGCTTAACACTAACCGCAGCAAGTAGAGTGGTCATCTTTGACCCTAGCTGGAATCCTGCAACTGATGCTCAAGCTGTGGATAGAGTTTACCGAATTGGACAAAAAGAAAATGTTGTAGTTTATAGGCTAATCACTTGTGGAACTGTAGAGGAAAAAATATACAGAAGACAGGTTTTCAAGGACTCATTAATAAGACAAACTACTGGTGATAAAAAGAACCCTTTCCGATATTTTAGTAAACAAGAATTGAGAGAGCTCTTTACAATTGAGGATTTTCAGAACTCTGCAACCCAGATGCAGCTTCAGTCTTTGCATGCTGCTCAGAGGAGATCTGATAAGAAACTAGATGAACATATTGCCTTCCTGCACTCTTTGAGGATAGCTGGAATCTCAGACCATGATTTGATGTACACGCATGACCTATCTGTTAAAGAAGAGCTTGATGTGATCGAAGACTCTCACTATATTCAACAAAGGGTTCAGAAAGCTCAATTCCTTGTTGAATTCGAGTCTCAAAATACAGAGTTCTTAATGGAAAGACAAAAAGCTGGAAACGAGGGGATATGGCTGAGAGAACCTGTATTTCCTTCTCAAATGAAGAAATGCCATGAATTAAATAAACCACAGCCTCGGCCTTCACCTCTTCTACCAACTCACCACACCCAGGAAGAAGAAATCAGTCCCCAAATGGCAAGTGTAATCATTGAGGATCTGCCCCAAGAGGGTGAAAAACAAGATCTCGCCAGGAGAAAGATGAACGTTACCACCCCACAAGATGGTAGGCACCCGTGTGCAAGTACATTTGATGCTGATTTTGTAGCTACTTTACCCAAGGGGTGTGAAGATGTAGAAGAAATTTGGACTGACTCTTTATCAGGAATGGCTCTCCAAAAAGAGGCATCACAAGAGGGGCCTATGCAGGAGGCACAGCAAGAGAGCCCTCAGGGAAGTTTCAATTTTTTACCTAGCAAGTCAGTCAGAGCTGATCTTGGGCCAAATCTAGATCAACTAGAGGAGGATGAGATTTTACATCACTGCAATCCCTGGCCTGCTAATCCCAAAACAAAGGAATATCAAAGGCCAGAATCGAATGTATCTGTTATTAAAATAGCTGATGATGACTTAGCAGCAGCCCACAGTGCACTACAGGATGCTCAAGTGAATGAGGCCAAGTTGGAAGAGGAACCTTTAGCGTCTTCAGCACAGTATGCATGTGACTTCAATCTTTTCTTGGAAGACTCTGCAGACAATGGACAAAAATTTTCCAGTCAGTCTTTGGAGCATGTGGAGAAAGAAAATAGCTTGTGTGGCTCTGCAGCTAATTCCAGAGCAGAGTCCGTGCATAGCAAAGCATGTCTCAGTGTGGATCTTTCTGAGAAAGATGATGAGCCAGAAGAAGTAGTAGTTAATGTGAAAGTCAGAAGAAAAGCTAGACGCATCGATTCAGATGATGAAGTTGAACATGATACTTTTATTACAGATACTTCAGGCACAAACCCATTCAACACATCTCCCTTCCCGTTTTTATCTGTAAAACAATTTGATGCCTCAACTCCCAAAAATGACRTCAGTCCACCTGGAAGGTTCTTTTCACCTAAAATATCTGATAGTTTAAATAAGTCTATAAACTCTAGAAGATCCCTGGCTTCTAGGAGGTCTCTTATTAATGTGGTTTTAGACCATGTGGAGGATATGGAGGAAAGACTTGACAATAGCAGTGAAGCAAAAGTTGCTGAAGATTACCTGGAGGAAGGAGCGGAGGAAAGCAGTGGTGAAGCCCCAGAGCATACAGAAGAAGATCCTTCCAGAGAAACACTGTCTTCAGAAAATAAGTCTAGCCGGTTAAGTACACCTAAGCCTGGTGCTCTGGCTCAGGAGACCTTTCCTGGTGACCCTGAGCCTTTGTCTGGTGGACAGTTGGTTGACTCTCCCCAGGATGAGGCACTGGAGGCTGCAGACGACTATGAGACTCTTGTCTTGCGTGGAAAAGAACTGAAAGAGTGTGGAAAAATACAGGAAGCCTTAGACTGCTTAGTTAAAGCACTTGACATAAAAAGCTCAGATTCTGAAGTCATGCTCATGACTTTAAGTTTGTATAAGCAACTTAATAAAACTTGA

Related Sequences

bmy_17130T0 Protein

Length: 1252 aa      View alignments
>bmy_17130T0
MARNDPENFAASKPGIPSVERKCFARYVKEAKEATKNGDLEEALKLFNLAKDIFPNEKVMSRIQKIQEALEELAEHGDDEFTDVCNSGLLLYRELHNQLFEYQKEGVAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTSLISTWLKEFVKWTPGMRVKTFHGPSKDERTRNLSRIQQRNGVIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRILLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACGLLNLGAVKFSVQDEIEGEDSSDVDHIDQISDDALMEESGKMIFLMGLLKRLRDEGHQTLVFCQSRRILNIIERLLKNRHFKILRIDGTVTHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFTIEDFQNSATQMQLQSLHAAQRRSDKKLDEHIAFLHSLRIAGISDHDLMYTHDLSVKEELDVIEDSHYIQQRVQKAQFLVEFESQNTEFLMERQKAGNEGIWLREPVFPSQMKKCHELNKPQPRPSPLLPTHHTQEEEISPQMASVIIEDLPQEGEKQDLARRKMNVTTPQDGRHPCASTFDADFVATLPKGCEDVEEIWTDSLSGMALQKEASQEGPMQEAQQESPQGSFNFLPSKSVRADLGPNLDQLEEDEILHHCNPWPANPKTKEYQRPESNVSVIKIADDDLAAAHSALQDAQVNEAKLEEEPLASSAQYACDFNLFLEDSADNGQKFSSQSLEHVEKENSLCGSAANSRAESVHSKACLSVDLSEKDDEPEEVVVNVKVRRKARRIDSDDEVEHDTFITDTSGTNPFNTSPFPFLSVKQFDASTPKNDXSPPGRFFSPKISDSLNKSINSRRSLASRRSLINVVLDHVEDMEERLDNSSEAKVAEDYLEEGAEESSGEAPEHTEEDPSRETLSSENKSSRLSTPKPGALAQETFPGDPEPLSGGQLVDSPQDEALEAADDYETLVLRGKELKECGKIQEALDCLVKALDIKSSDSEVMLMTLSLYKQLNKT*