Sequence detailsbmy_17130 (Coding sequence)

Part of scaffold_1431 (SequenceType object (1))

For more information consult the page for scaffold_1431 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ERCC6LENSTTRG00000010777 (Bottlenosed dolphin)

Gene Details

excision repair cross-complementing rodent repair deficiency, complementation group 6-like

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010199, Bottlenosed dolphin)

Protein Percentage 96.39%
cDNA percentage 97.62%
Ka/Ks Ratio 0.55164 (Ka = 0.0202, Ks = 0.0367)

ERCC6LENSBTAG00000005607 (Cow)

Gene Details

DNA excision repair protein ERCC-6-like

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007362, Cow)

Protein Percentage 90.18%
cDNA percentage 93.18%
Ka/Ks Ratio 0.3881 (Ka = 0.0525, Ks = 0.1353)

Additional orthologs identified in other species via the OPTIC pipeline.

ERCC6L (Human)   Ercc6l (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3756 bp    Location:262542..301563   Strand:+
Raw sequence 
>bmy_17130
ATGGCTCGCAATGATCCGGAAAACTTTGCAGCATCTAAGCCTGGCATTCCCTCTGTGGAGAGGAAATGCTTCGCAAGATACGTGAAAGAGGCCAAAGAAGCAACTAAGAATGGAGATCTGGAAGAAGCACTTAAACTTTTCAATTTGGCAAAGGACATTTTTCCCAATGAAAAGGTGATGAGCAGAATCCAAAAAATACAGGAAGCCTTGGAGGAGTTGGCAGAACATGGAGATGATGAATTCACAGATGTGTGCAACTCTGGCCTGCTGCTCTATCGAGAACTGCACAACCAACTATTTGAGTACCAGAAGGAAGGTGTAGCTTTCCTATATAGCCTGTATAGGGATGGAAGGAGAGGTGGTATTCTGGCAGATGATATGGGATTAGGAAAGACTGTTCAAATCATCGCTTTCCTTTCTGGTATGTTTGATGCTTCACTTGTGAACCATGTGCTACTGATCATGCCAACCAGTCTCATCAGCACATGGCTAAAAGAATTTGTCAAGTGGACCCCAGGAATGAGAGTCAAAACCTTTCACGGTCCTAGCAAGGATGAACGTACCAGAAACCTCAGTCGGATTCAGCAAAGGAATGGTGTCATTATCACCACATACCAAATGTTAATCAATAATTGGCAGCAACTTTCCAGCTTGAATGGCCAAGAGTTTGTGTGGGACTATGTCATCCTTGATGAAGCACATAAAATAAAAACCTCATCTACCAAGTCAGCAATATGTGCTCGTGCAATCCCTGCCAGTAATCGCATCCTCCTCACAGGAACCCCGATCCAGAATAATTTACAAGAACTGTGGTCCCTGTTTGATTTTGCTTGTCAAGGGTCCCTGCTAGGAACATTAAAAACTTTTAAAATGGAGTACGAAAATCCTATTACTAGAGCAAGAGAGAAGGATGCTACCCCAGGAGAAAAAGCCTTAGGATTTAAAATATCTGAAAACTTAATGGCAATCATAAAGCCCTATTTTCTTAGGAGGACTAAAGAAGAGGTACAGAAGAAAAAGTCAAGCAACCCAGAGGTCCAGCTTAGTGAAAAGAGTCCAGATGTTGGTGCCATATGTGAAATGCCTTCCCTTTCCAGAAAAAATGATTTAATTATTTGGATACGTCTTGTACCTTTACAGGAAGAAATATACAGGAAATTCGTGTCTCTAGATCATATCAAGGAGTTGTTAATGGAGACACGCTCACCTTTGGCTGAGCTAGGTGTCTTAAAGAAGCTCTGTGATCATCCTAGGCTGCTATCTGCACGGGCTTGTGGTTTGCTGAATCTAGGAGCTGTCAAATTCTCTGTTCAAGATGAAATTGAAGGGGAAGATTCCTCAGATGTGGACCATATTGATCAAATAAGTGATGATGCACTGATGGAAGAATCTGGAAAAATGATATTTCTAATGGGCCTGCTTAAGAGACTGCGAGATGAAGGGCATCAAACTCTGGTGTTTTGCCAGTCAAGACGAATTCTAAACATCATCGAACGCCTGTTAAAGAATAGGCACTTTAAGATATTGAGAATCGATGGAACAGTTACTCATCTTGTGGAACGAGAAAAAAGAATTAGCTTATTCCAGCAAAATAAAGATTACTCTGTTTTTCTGCTTACCACTCAAGTAGGTGGTGTTGGCTTAACACTAACCGCAGCAAGTAGAGTGGTCATCTTTGACCCTAGCTGGAATCCTGCAACTGATGCTCAAGCTGTGGATAGAGTTTACCGAATTGGACAAAAAGAAAATGTTGTAGTTTATAGGCTAATCACTTGTGGAACTGTAGAGGAAAAAATATACAGAAGACAGGTTTTCAAGGACTCATTAATAAGACAAACTACTGGTGATAAAAAGAACCCTTTCCGATATTTTAGTAAACAAGAATTGAGAGAGCTCTTTACAATTGAGGATTTTCAGAACTCTGCAACCCAGATGCAGCTTCAGTCTTTGCATGCTGCTCAGAGGAGATCTGATAAGAAACTAGATGAACATATTGCCTTCCTGCACTCTTTGAGGATAGCTGGAATCTCAGACCATGATTTGATGTACACGCATGACCTATCTGTTAAAGAAGAGCTTGATGTGATCGAAGACTCTCACTATATTCAACAAAGGGTTCAGAAAGCTCAATTCCTTGTTGAATTCGAGTCTCAAAATACAGAGTTCTTAATGGAAAGACAAAAAGCTGGAAACGAGGGGATATGGCTGAGAGAACCTGTATTTCCTTCTCAAATGAAGAAATGCCATGAATTAAATAAACCACAGCCTCGGCCTTCACCTCTTCTACCAACTCACCACACCCAGGAAGAAGAAATCAGTCCCCAAATGGCAAGTGTAATCATTGAGGATCTGCCCCAAGAGGGTGAAAAACAAGATCTCGCCAGGAGAAAGATGAACGTTACCACCCCACAAGATGGTAGGCACCCGTGTGCAAGTACATTTGATGCTGATTTTGTAGCTACTTTACCCAAGGGGTGTGAAGATGTAGAAGAAATTTGGACTGACTCTTTATCAGGAATGGCTCTCCAAAAAGAGGCATCACAAGAGGGGCCTATGCAGGAGGCACAGCAAGAGAGCCCTCAGGGAAGTTTCAATTTTTTACCTAGCAAGTCAGTCAGAGCTGATCTTGGGCCAAATCTAGATCAACTAGAGGAGGATGAGATTTTACATCACTGCAATCCCTGGCCTGCTAATCCCAAAACAAAGGAATATCAAAGGCCAGAATCGAATGTATCTGTTATTAAAATAGCTGATGATGACTTAGCAGCAGCCCACAGTGCACTACAGGATGCTCAAGTGAATGAGGCCAAGTTGGAAGAGGAACCTTTAGCGTCTTCAGCACAGTATGCATGTGACTTCAATCTTTTCTTGGAAGACTCTGCAGACAATGGACAAAAATTTTCCAGTCAGTCTTTGGAGCATGTGGAGAAAGAAAATAGCTTGTGTGGCTCTGCAGCTAATTCCAGAGCAGAGTCCGTGCATAGCAAAGCATGTCTCAGTGTGGATCTTTCTGAGAAAGATGATGAGCCAGAAGAAGTAGTAGTTAATGTGAAAGTCAGAAGAAAAGCTAGACGCATCGATTCAGATGATGAAGTTGAACATGATACTTTTATTACAGATACTTCAGGCACAAACCCATTCAACACATCTCCCTTCCCGTTTTTATCTGTAAAACAATTTGATGCCTCAACTCCCAAAAATGACRTCAGTCCACCTGGAAGGTTCTTTTCACCTAAAATATCTGATAGTTTAAATAAGTCTATAAACTCTAGAAGATCCCTGGCTTCTAGGAGGTCTCTTATTAATGTGGTTTTAGACCATGTGGAGGATATGGAGGAAAGACTTGACAATAGCAGTGAAGCAAAAGTTGCTGAAGATTACCTGGAGGAAGGAGCGGAGGAAAGCAGTGGTGAAGCCCCAGAGCATACAGAAGAAGATCCTTCCAGAGAAACACTGTCTTCAGAAAATAAGTCTAGCCGGTTAAGTACACCTAAGCCTGGTGCTCTGGCTCAGGAGACCTTTCCTGGTGACCCTGAGCCTTTGTCTGGTGGACAGTTGGTTGACTCTCCCCAGGATGAGGCACTGGAGGCTGCAGACGACTATGAGACTCTTGTCTTGCGTGGAAAAGAACTGAAAGAGTGTGGAAAAATACAGGAAGCCTTAGACTGCTTAGTTAAAGCACTTGACATAAAAAGCTCAGATTCTGAAGTCATGCTCATGACTTTAAGTTTGTATAAGCAACTTAATAAAACTTGA

Related Sequences

bmy_17130T0 SequenceType object (3)

Length: 1252 aa      View alignments
>bmy_17130T0
MARNDPENFAASKPGIPSVERKCFARYVKEAKEATKNGDLEEALKLFNLAKDIFPNEKVMSRIQKIQEALEELAEHGDDEFTDVCNSGLLLYRELHNQLFEYQKEGVAFLYSLYRDGRRGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTSLISTWLKEFVKWTPGMRVKTFHGPSKDERTRNLSRIQQRNGVIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPASNRILLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLKKLCDHPRLLSARACGLLNLGAVKFSVQDEIEGEDSSDVDHIDQISDDALMEESGKMIFLMGLLKRLRDEGHQTLVFCQSRRILNIIERLLKNRHFKILRIDGTVTHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFTIEDFQNSATQMQLQSLHAAQRRSDKKLDEHIAFLHSLRIAGISDHDLMYTHDLSVKEELDVIEDSHYIQQRVQKAQFLVEFESQNTEFLMERQKAGNEGIWLREPVFPSQMKKCHELNKPQPRPSPLLPTHHTQEEEISPQMASVIIEDLPQEGEKQDLARRKMNVTTPQDGRHPCASTFDADFVATLPKGCEDVEEIWTDSLSGMALQKEASQEGPMQEAQQESPQGSFNFLPSKSVRADLGPNLDQLEEDEILHHCNPWPANPKTKEYQRPESNVSVIKIADDDLAAAHSALQDAQVNEAKLEEEPLASSAQYACDFNLFLEDSADNGQKFSSQSLEHVEKENSLCGSAANSRAESVHSKACLSVDLSEKDDEPEEVVVNVKVRRKARRIDSDDEVEHDTFITDTSGTNPFNTSPFPFLSVKQFDASTPKNDXSPPGRFFSPKISDSLNKSINSRRSLASRRSLINVVLDHVEDMEERLDNSSEAKVAEDYLEEGAEESSGEAPEHTEEDPSRETLSSENKSSRLSTPKPGALAQETFPGDPEPLSGGQLVDSPQDEALEAADDYETLVLRGKELKECGKIQEALDCLVKALDIKSSDSEVMLMTLSLYKQLNKT*