Part of scaffold_1460 (Scaffold)

For more information consult the page for scaffold_1460 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SEMA3C ENSTTRG00000008739 (Bottlenosed dolphin)

Gene Details

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008290, Bottlenosed dolphin)

Protein Percentage 66.11%
cDNA percentage 69.05%
Ka/Ks Ratio 0.53236 (Ka = 0.1017, Ks = 0.1911)

SEMA3C ENSBTAG00000006138 (Cow)

Gene Details

Semaphorin-3C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008076, Cow)

Protein Percentage 88.07%
cDNA percentage 88.54%
Ka/Ks Ratio 0.31997 (Ka = 0.0867, Ks = 0.271)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1554 bp    Location:361648..292138   Strand:-
>bmy_17146
ATGTGGTCAATACAGAAAATGAGAGTACAACCATTTGACAGAGTACTGTACAGTAAGTCCCCTACATATGAACCTTCAAGTTTCGAACTTTCAAAGATGCGAATGTGCGTTTGCATGTCCAGTCACTGTGCCTTATTTCCACCAAAAGATTTTACTTGTACCCTGAAAATTAAAGAGACAGCCTTGGCTAATGCTTACCTCATGGAAGCAACATCACCAAAAGCAGTAACTTGGCTAAACAGGAACTGGCATGAAGGGTCAGAGAACTTTATGGGGGTGAGATGGGACAAGAGACCTCACTCAGCACAAGAGCTTCGAGAAACCAAGACCTCTGAATACTTCAGCCTATCTCACCACCCTTTAGACTACAGGATATTATTAATGGATGAAGATCAGGACCGGATATATGTGGGCAGCAAAGATCACATTCTTTCCTTGAATATTAACAACATAAGTCAAGAACCTTTGAGTGTTTTCTGGCCAGCATCTACAATCAAAGTTGAAGAGTGCAAAATGGCTGGCAAAGATCCCACAGACCAAGTTTTCGTGATTGACTCCAAGTGTGAATCTGGAAAAGGACGCTGCTCTTTCAACCCCAATGTGAACACAGTGTCTGTTATGATCAATGAGGAGCTTTTCTCTGGAATGTATATAGATTTCATGGGGACAGATGCAGCTATTTTTCGAAGTTTAACCAAGAGGAATGCAGTCAGAACTGATCAACACAATTCCAAATGGCTAAGTGAACCTATGTTTGTGGATGCACATGTTATCCCAGATGGCACTGATCCAAATGATGCTAAGGTGTACTTCTTCTTCAAAGAGAAACTGACCGACAATAGCAGAAGCACAAAACAGATTCATTCCATGGTTGCTAGGATATGTCCTTCTATTTTTAAACATTACAATATTCCACTGATTTTGGAGCTTATCTGCTTCTCAGTCATTTGGAACAAGGCAAATGACACTGGTGGACTGCGTAGCCTTGTCAACAAGTGGACTACCTTCTTAAAAGCGAGGCTGGTATGCTCGGTAACTGATGAAGATGGTCCGGAAACACACTTTGATGAACTAGAGAGAGAAGAGAGAGAGGATGTGTTTCTGCTGGAAACTGATAACCCAAGGACAACACTAGTGTATGGCATTTTTACAACATCAAGCTCGGTTTTTAAAGGATCAGCAGTGTGTGTGTATCATTTATCTGATATACAGACTGTGTTTAATGGGCCTTTTGCCCACAAAGAAGGGCCCAATCATCAGCTGATTTCCTACCAGGGTAGAATTCCTTATCCTCGCCCTGGAACTTGCCCAGGAGGAGCATTTACACCCAATATGCGAACCACCAAGGACTTCCCGGATGATGTTGTCACTTTTATTCGGAACCACCCTCTCATGTACAATTCCATCTACCCAGTCCACAGAAGGCCTTTGATTGTTCGTACAGGCACTGACTATAAGTACACAAAAATAGCTGTGGATCGAGTGAATGCTGCCGATGGAAGGTCTATAAAACAGCAGGCAAGTGTTCTCATAGGATTAACATTTCCATTTTAA

Related Sequences

bmy_17146T0 Protein

Length: 518 aa      View alignments
>bmy_17146T0
MWSIQKMRVQPFDRVLYSKSPTYEPSSFELSKMRMCVCMSSHCALFPPKDFTCTLKIKETALANAYLMEATSPKAVTWLNRNWHEGSENFMGVRWDKRPHSAQELRETKTSEYFSLSHHPLDYRILLMDEDQDRIYVGSKDHILSLNINNISQEPLSVFWPASTIKVEECKMAGKDPTDQVFVIDSKCESGKGRCSFNPNVNTVSVMINEELFSGMYIDFMGTDAAIFRSLTKRNAVRTDQHNSKWLSEPMFVDAHVIPDGTDPNDAKVYFFFKEKLTDNSRSTKQIHSMVARICPSIFKHYNIPLILELICFSVIWNKANDTGGLRSLVNKWTTFLKARLVCSVTDEDGPETHFDELEREEREDVFLLETDNPRTTLVYGIFTTSSSVFKGSAVCVYHLSDIQTVFNGPFAHKEGPNHQLISYQGRIPYPRPGTCPGGAFTPNMRTTKDFPDDVVTFIRNHPLMYNSIYPVHRRPLIVRTGTDYKYTKIAVDRVNAADGRSIKQQASVLIGLTFPF*