Part of scaffold_1442 (Scaffold)

For more information consult the page for scaffold_1442 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CUEDC1 ENSTTRG00000017160 (Bottlenosed dolphin)

Gene Details

CUE domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016265, Bottlenosed dolphin)

Protein Percentage 94.92%
cDNA percentage 94.8%
Ka/Ks Ratio 0.15639 (Ka = 0.0144, Ks = 0.0919)

BT.62349 ENSBTAG00000007147 (Cow)

Gene Details

CUE domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000009405, Cow)

Protein Percentage 85.56%
cDNA percentage 86.74%
Ka/Ks Ratio 0.18184 (Ka = 0.0888, Ks = 0.4885)

CUEDC1  (Minke Whale)

Gene Details

CUE domain containing 1

External Links

Gene match (Identifier: BACU006269, Minke Whale)

Protein Percentage 79.78%
cDNA percentage 82.87%
Ka/Ks Ratio 0.36382 (Ka = 0.1542, Ks = 0.424)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1179 bp    Location:329113..309246   Strand:-
>bmy_17154
ATGACCAGCCTGTTCCGCCGGAGCAGCGGCGGCGGCGGCGGCGGCGGGGGCGGCTCGGCGGCGGCGCGCGGGGCTGGGGGCAGCGCGGCCGCCTCGCAGGAGCTCAACAACAGCCGGCCCGCCCGCCAGGTGCGTCGCCTCGAGTTCAACCAGGCCATGGACGACTTCAAGACCATGTTCCCCAACATGGATTACGACATCATCGAGTGCGTGCTGCGTGCCAACAGCGGCGCGGTGGACGCCACCATCGACCAGCTGCTGCAGATGAACCTGGAGGCGGGTGGCGGCAGCGTCTACGAGGACAGCTCGGACTCGGAGGACAGCATCCCCCCGGAGCCCCCGCCTGTGTACTCCCCTCCAGCCTACCACATGCACATGTTCGACAGGCCTTACCCTCTGGCTCCCCCGACTCCACCTCCCCGCATCGACGTGCTGGGCTCTGCGCCCCCTTCCGGCCAGAGGCGCTATCGGAACTGGAACCCCCCACTGCTAGGCAACCTCCCCGAAGACTTTCTCCGCATCCTGCCCCAGCAGCTGGACAGCATACAGGCTAACTCCGGGGGCTCCAAGCCTGCGAGCACAGAGGGAGGCCGGCCCCTCACGGCCGGGCCCGGACCCCGGGACCAGGAGAACCGCTGGAAGCAATACCTGGAGGACGAGAGGATCGCGCTCTTCCTGCAGAACGAGGAGTTCATGAAGGAGCTGCAGCGCAACCGCGATTTCCTCCTCGCCCTGGAGAGAGATCGACTGAAATACGAGTCCCAGAAATCTACATCCAGCAGCGTAGCTGTGGGAAATGACTTTGACTTTCCCGCTCCTGTCCCAGGAACCAGCGACAACAACCCCGCTGTGTCTGAAGATGCCTTATTCAGGGACAAGTTGAAACACATGGGAAAATCCACCCGGAGGAAGCTGTTTGAACTGGCCAGGGCCTTCTCGGAGAAGACCAAGATGAGGAAGTCAAAGAGGAAACACTTGTTGAAGCATCAGTCACGAAGACTTCCGGGGAAGGCGACAGGAGGTGCCCAAGGTGGAGGAAGCACTAAGGGAAGGACAGTAAGAGATGCAGCAGTTTCTCCTCGCCGGAGACCATCTGACCCGGTAGAGGCAGCCAGAGAGCAAACCGGCCCTCCGCTGAAGAGCCCAGCTGCAGCCGGATGGATGGTGCTTGAGTTCTGA

Related Sequences

bmy_17154T0 Protein

Length: 393 aa      View alignments
>bmy_17154T0
MTSLFRRSSGGGGGGGGGSAAARGAGGSAAASQELNNSRPARQVRRLEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLEAGGGSVYEDSSDSEDSIPPEPPPVYSPPAYHMHMFDRPYPLAPPTPPPRIDVLGSAPPSGQRRYRNWNPPLLGNLPEDFLRILPQQLDSIQANSGGSKPASTEGGRPLTAGPGPRDQENRWKQYLEDERIALFLQNEEFMKELQRNRDFLLALERDRLKYESQKSTSSSVAVGNDFDFPAPVPGTSDNNPAVSEDALFRDKLKHMGKSTRRKLFELARAFSEKTKMRKSKRKHLLKHQSRRLPGKATGGAQGGGSTKGRTVRDAAVSPRRRPSDPVEAAREQTGPPLKSPAAAGWMVLEF*