Part of scaffold_1435 (Scaffold)

For more information consult the page for scaffold_1435 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NDNF ENSTTRG00000007371 (Bottlenosed dolphin)

Gene Details

neuron-derived neurotrophic factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006974, Bottlenosed dolphin)

Protein Percentage 96.3%
cDNA percentage 96.47%
Ka/Ks Ratio 0.24146 (Ka = 0.0196, Ks = 0.0811)

BT.61452 ENSBTAG00000010634 (Cow)

Gene Details

protein NDNF precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014058, Cow)

Protein Percentage 95.06%
cDNA percentage 91.9%
Ka/Ks Ratio 0.07717 (Ka = 0.0237, Ks = 0.3076)

NDNF  (Minke Whale)

Gene Details

neuron-derived neurotrophic factor

External Links

Gene match (Identifier: BACU004216, Minke Whale)

Protein Percentage 97.19%
cDNA percentage 97.72%
Ka/Ks Ratio 0.28534 (Ka = 0.0141, Ks = 0.0494)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1713 bp    Location:61523..36384   Strand:-
>bmy_17158
ATGCGGATGGTGCCTCTCCACTGGTGTATGCTGTGGCTGCTGTTACCACTCAGCTCCAGGACCCAGAAGCTACCCACTCGAGATGAGGAGCTCTTTCAGATGCAAATTCGGGACAAGGCATTTTTTCATGATTCGTCAGTAATTCCAGATGGAGCTGAAATTAGCAGTTATCTCTTTAGAGACACACCTAAAAGGTATTTCTTTGTGGTTGAAGAAGACAACACCCCATTGTCAGTCACAGTGACTCCCTGCGATGCGCCCTTAGCGTGGACGTTGAGCCTCCAGGAGCTGCCAGAGGAGGCGAGCGGGGAAGGCTCAGGGGATCCAGAGCCTCTAGATCAGCAGAAGCAGCATATCATTAATGTGGAAGGCACAGAGTTATTCTCCTACAAAGGCAACGACGTGGAATATTTCATATCTTCTAGTTCTCCATCTGGTTTATATCAGTTGGAGCTTCTTTCAACAGAGAAAGACACACATTTCAAAGTATATGCCACCACAACTCCAGAGTCTGACCAGCCCTACCCTGAATTACCTTACGACCCAAGAGTCGATGTTACCTCCCTGGGATGCACCACGGTCACTTTGGCTTGGAAACCGAGCCCCACGGCCTCTTTGCTGAAACAGCCCATTCAGTACTGTGTGGTCATCAACAAGGAGCACAATTTCAAAAGTCTCTGCGCAGTGGAAGCGAAGCTGAGTGCGGACGACGCTTTCATGATGGCACCAAAGCCCGGTCTGGACTTCAGCCCTTTTGACTTTGCCCACTTCGGATTTGCTTCGGATGCTTCAGCTAAAGAGCGCAGCTTCCTGACAAAGCCGTCTCCGAAACTGGGGCGGCATGCCTACTCGAGGCCCAAGGCCGACATTCAGAAAATCTGCATGGGAAACAAGAACATCTTCACCGTCTCGGATCTGAAACCCGACACGCAGTACTACTTCGACGTCTTCGTGGCCAACAGCGACAGCAACATGAGCACTGCTTACGTGGGCACCTTTGCCAGGACCAAGGAAGAAGCGAAACAGAAGACAGTTGGGCTGAAAGATGGGAAAGTTACGGATGTGTTTGTTAAAAGGAAGGGGGCAAAGTTTCTACGGTTTGCTCCGGTCTCGTCTCACCAAAAAGTCACCTTCTTTATTCACTCTTGTCTGGACGCTGTCCAAATCCAAGTGAGAAGAGATGGGAAACTTCTTCTGTCTCAGAGTGTGGAAGGCATTCGGCAGTTTCAGCTGAGAGGAAAGCCTAAAGCCAAATATCTCATTCGACTGAAAGGAAACAAGAAGGGAGCGGCTATGTTGAAAATACTAGCTACCACCAGACCCAATAAGCAGTCATTTCCCTCTCTTCCTGAAGACACACGCATCAAAGCCTTCGACAAGCTCCGTACCTGTTCTTCGGCCACCGTGGCTTGGCTAGGCACCCAGGAAAGGAACAAGTTTTGCATCTACAAAAAGGAAGTGGATGATAATTACAGTGAAGACCAGAAGAAAAGAGAGCAAAACCAATGCCTTGGACCAGATACAAGGAAGAAATCAGAGAAGGTCCTCTGTAAATATTTCCACAGTCAAAACCTGCAAAAAGCGGTGACCACAGAAACAATTAAAGGTCTTCAGCCTGGAAAATCTTACCTGCTGGACGTTTATGTCACAGGACATGGGGGGCACTCTGTGAAGTATCAGAGTAAAGTTGTGAAAACCAGGAAGTTCTGTTAG

Related Sequences

bmy_17158T0 Protein

Length: 571 aa      View alignments
>bmy_17158T0
MRMVPLHWCMLWLLLPLSSRTQKLPTRDEELFQMQIRDKAFFHDSSVIPDGAEISSYLFRDTPKRYFFVVEEDNTPLSVTVTPCDAPLAWTLSLQELPEEASGEGSGDPEPLDQQKQHIINVEGTELFSYKGNDVEYFISSSSPSGLYQLELLSTEKDTHFKVYATTTPESDQPYPELPYDPRVDVTSLGCTTVTLAWKPSPTASLLKQPIQYCVVINKEHNFKSLCAVEAKLSADDAFMMAPKPGLDFSPFDFAHFGFASDASAKERSFLTKPSPKLGRHAYSRPKADIQKICMGNKNIFTVSDLKPDTQYYFDVFVANSDSNMSTAYVGTFARTKEEAKQKTVGLKDGKVTDVFVKRKGAKFLRFAPVSSHQKVTFFIHSCLDAVQIQVRRDGKLLLSQSVEGIRQFQLRGKPKAKYLIRLKGNKKGAAMLKILATTRPNKQSFPSLPEDTRIKAFDKLRTCSSATVAWLGTQERNKFCIYKKEVDDNYSEDQKKREQNQCLGPDTRKKSEKVLCKYFHSQNLQKAVTTETIKGLQPGKSYLLDVYVTGHGGHSVKYQSKVVKTRKFC*