Sequence detailsbmy_17190 (Coding sequence)

Part of scaffold_1450 (SequenceType object (1))

For more information consult the page for scaffold_1450 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLDN8ENSBTAG00000039820 (Cow)

Gene Details

claudin-8

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000042425, Cow)

Protein Percentage 90.87%
cDNA percentage 90.71%
Ka/Ks Ratio 0.15219 (Ka = 0.0427, Ks = 0.2806)

Additional orthologs identified in other species via the OPTIC pipeline.

CLDN8 (Human)   Cldn8 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 627 bp    Location:509501..510127   Strand:+
Raw sequence 
>bmy_17190
ATGGTGGGCACAGTGGCTGTCACCGTCATGCCTCAGTGGAGAGTGTCTGCCTTCATTGGAAGCAACATTGTGGTTTTTGAAAACCTCTGGGAAGGACTGTGGATGAATTGCATGAGACACGCTAATATCAGAATGCAGTGCAAAATCTACGATTCCCTGCTGGCTCTCTCTCCGGACCTACAGGCATCCAGAGGACTGATGTGTGCTGCCTCTGCGCTGTCCTTCCTGGCTTTCATGATGGCAGTCCTCGGCATGAAGTGCACCAGATGCACCGGGGACRATGAGAAGGTGAAGGGTTACATCCTGCTAACGGCTGGAGTAGTGTTCATCGTCACTGGTCTTGTGGTGCTCATCCCTGTGAGCTGGGTTGCCAATTCCATCATCAGAGACTTCTACAACCCAATAGTGGATATTGCCCAAAAACGTGAGCTGGGAGAAGCCCTCTACATAGGCTGGACCACGGCGCTGGTGCTGATCGCTGGAGGGGTACTGTTCTGTTGTGTTTCTTGTTGCAATGAAARGAGCAGTAGCTACAGATATTCCATACCTTCCCACCGAACGACCCAGAAAAGCTACCACATGGAAAAGAAGTCACCGAGTGTGTACTCCAAAAGTCAGTATGTGTAG

Related Sequences

bmy_17190T0 SequenceType object (3)

Length: 209 aa      View alignments
>bmy_17190T0
MVGTVAVTVMPQWRVSAFIGSNIVVFENLWEGLWMNCMRHANIRMQCKIYDSLLALSPDLQASRGLMCAASALSFLAFMMAVLGMKCTRCTGDBEKVKGYILLTAGVVFIVTGLVVLIPVSWVANSIIRDFYNPIVDIAQKRELGEALYIGWTTALVLIAGGVLFCCVSCCNEXSSSYRYSIPSHRTTQKSYHMEKKSPSVYSKSQYV*