Part of scaffold_1454 (Scaffold)

For more information consult the page for scaffold_1454 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SNAPC1 ENSTTRG00000012564 (Bottlenosed dolphin)

Gene Details

small nuclear RNA activating complex, polypeptide 1, 43kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011921, Bottlenosed dolphin)

Protein Percentage 86.99%
cDNA percentage 89.25%
Ka/Ks Ratio 0.59107 (Ka = 0.02, Ks = 0.0338)

SNAPC1 ENSBTAG00000020937 (Cow)

Gene Details

snRNA-activating protein complex subunit 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027888, Cow)

Protein Percentage 85.18%
cDNA percentage 91.73%
Ka/Ks Ratio 0.52488 (Ka = 0.0743, Ks = 0.1416)

SNAPC1  (Minke Whale)

Gene Details

small nuclear RNA activating complex, polypeptide 1, 43kDa

External Links

Gene match (Identifier: BACU015402, Minke Whale)

Protein Percentage 97.35%
cDNA percentage 98.33%
Ka/Ks Ratio 0.34674 (Ka = 0.0117, Ks = 0.0338)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1128 bp    Location:331897..307891   Strand:-
>bmy_17197
ATGGGGGCTCCTGCAGGTTTGCAGGCAGACTATGAGACGCTGCTCAGCCGCTTCCAGGAGATGGACAGCGTGCGCTTCGAGGACTTCACCGACCTCTGGAGGAGTATGAAGTTCGGGACCATCTTCTGTGGTAGAATGAGAAATTTAGAAAAGAACACGTTTACAAAGGAAGCTTTGGCTTTGGCGTGGCGATATTTTTTACCTCCATACACCTTCCAAATCAGAGTTTGTGCTTTGTATCTGCTATATGGATTATATAACACCCAACTGTGTCAACCAAAACAAAAGATTAGAGTTGCCGTGAAGGATTGGGATGAAATTTTAAAATTTCAGCAAGATTTGATAAAGGCACAACATTTTGATGCAGCTTATATTTTTAGGAAGCTACGACTAGACAGAGCATTTCACTTTACAGCAATGCCTACATTGCTGTCATACAGAATGAAGAAAAAAATTCAACGAGCTGAAGTTACTGAAGACTTTAAGGACCCAAATGATCATGTAATGAAACTTATCACTTCTGATGTATTAGAGGAAATGCTGAATGTTCATGACCATTATCAGAGAATGAAACATATAATTTCAGCTGATAGATCCAATCCAGACAAAGCCCTCAGCTTGATAAAGGATGATTTTTTTGACAACATCAAGAACATAGTTTTGGAGCATCAGCAATGGCACAAAGACAGAAAGAATCTATCCTTAAAATCGAAAGCTAAAGATGGAGAAGAAAAGAGTGAAGGAAATTCACAACAATCAGAGAGAAGTGAAAGGGCAGAATCATTAGCGAAAATAAAATCAAAGGCCTTTTCAGTTTTTGTTCAGGCATCCAAGTCAAGAAGGCATCGTCAGGTCAAACTTGATTCTTCTGACTCTGATTCTGCATCTAGTCAAGGACAAACCAAAGCAACTAGGAAAAGAAGAAACAAAGAGACATTGAAACCAGTAGGAAGGAAGATGTCTTCCAGAAACAGAGGTGACATGCAAAAGGTACAGAGGGAAGATAAATCTTTAAGTCTGAGTATGCCTGTAATTACAGAAGAGGAAGAGGAGAATGAAAGTTTTAGTGAAACAGAGTTCACTGCACCCAAGAGGAGAAGAAAACACAGAACAAAGAGCCTGGTGTAG

Related Sequences

bmy_17197T0 Protein

Length: 376 aa      View alignments
>bmy_17197T0
MGAPAGLQADYETLLSRFQEMDSVRFEDFTDLWRSMKFGTIFCGRMRNLEKNTFTKEALALAWRYFLPPYTFQIRVCALYLLYGLYNTQLCQPKQKIRVAVKDWDEILKFQQDLIKAQHFDAAYIFRKLRLDRAFHFTAMPTLLSYRMKKKIQRAEVTEDFKDPNDHVMKLITSDVLEEMLNVHDHYQRMKHIISADRSNPDKALSLIKDDFFDNIKNIVLEHQQWHKDRKNLSLKSKAKDGEEKSEGNSQQSERSERAESLAKIKSKAFSVFVQASKSRRHRQVKLDSSDSDSASSQGQTKATRKRRNKETLKPVGRKMSSRNRGDMQKVQREDKSLSLSMPVITEEEEENESFSETEFTAPKRRRKHRTKSLV*