Sequence detailsbmy_17201 (Coding sequence)

Part of scaffold_1468 (SequenceType object (1))

For more information consult the page for scaffold_1468 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC85AENSBTAG00000012394 (Cow)

Gene Details

coiled-coil domain-containing protein 85A

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000016446, Cow)

Protein Percentage 88.17%
cDNA percentage 87.4%
Ka/Ks Ratio 0.10211 (Ka = 0.068, Ks = 0.6655)

Additional orthologs identified in other species via the OPTIC pipeline.

CCDC85A (Human)   Ccdc85a (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1173 bp    Location:299953..289017   Strand:-
Raw sequence 
>bmy_17201
ATGTCGAAGGCGGCCGGAGGCGCATCGGCGGCGGCGGAAAGTTGTCCGCCAACCTCTGCCGGCCCGTCTGCGGCCACTGCCGTGGAGGACCTGTCCAAAGTGTCGGACGAGGAGCTGCTGCAGTGGAGCAAGGAGGAGCTGATCCGCTGCCTGCGGCGCGCGGAGGCGGAGAAGGTGAGCGCGATGCTGGACCACAGCAACCTCATCCGCGAGGTCAACCGCCGCCTGCAGCTGCACCTCGGCGAGATCCGCGGGCTCAAGGATATTAACCAGAAACTCCAGGAGGACAACCAGGAACTGAGGGACCTCTGCTGTTTCCTGGATGATGACCGGCAGAAGGGCAAGAGGGTGTCCCGGGAGTGGCAGAGACTGGGCCGCTACACGGCGGGGGTGATGCACAAGGAGGTGGCCTTATACCTGCAGAAGCTGAAGGAGCTGGAGGTGAAGCAGGAGGAGGTGGTGAAGGAGAACCTGGAGCTCAAGGAGCTCTGCGTGCTGCTGGACGAGGAGAAGGGCGCGGGCTGCGCGGGCAGCCGCTGCTCCATCGACAGCCAGGCCAGCCTCTGCCAGCTCGCCGCCACCACGGCGCCCTACGTGCGGGACGTGGGCGACGGCAGCAGCACTTCCAGCACGGGCAGCACCGACAGCCCGGACCACAAGCATCACGCGAGCGGCGGCAGCCCGGAGCACCTGCAGAAGGCCCGGGCCGAGGGCAGCCCGGAGCACTCCAAGCACAGCAGCGCCAGCCCTGAGCATCTGCAGAAGCCCAGGGCCTCCACGACCCCAGATCACCCCAAAGCCCTCAAAGGACCCAGCCCCGAGCACCACAAACCCTTGTGCAAGGGCAGCCCCGAACAGCAAAGGCACCCGCACGCGGGGAGCAGCCCCGAAGCGCTGCCCAAGCACGTGCTGAGCGGGAGCCCGGAGCACTTACAGAAGCACAGGCCCGGGGGCAGCCCCGAGCACGCCAGGCACAGCGGAGGGAGCCCCGAGCATCTTCAGAAACACGCCCTCGGCGGGAGCCTGGAGCACCTACCCAGAGCCCGGGGCACCAGCCCGGAGCACCTCAAACAGCATTACGGGGGGAGCCCCGATCACAAACACGTGGGCGGAGGCGGCGGAGGCGGCGGCGGCGGCGGTGGCGGTGGTGGCATGCTGAAAATTGACTCCTGA

Related Sequences

bmy_17201T0 SequenceType object (3)

Length: 391 aa      
>bmy_17201T0
MSKAAGGASAAAESCPPTSAGPSAATAVEDLSKVSDEELLQWSKEELIRCLRRAEAEKVSAMLDHSNLIREVNRRLQLHLGEIRGLKDINQKLQEDNQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENLELKELCVLLDEEKGAGCAGSRCSIDSQASLCQLAATTAPYVRDVGDGSSTSSTGSTDSPDHKHHASGGSPEHLQKARAEGSPEHSKHSSASPEHLQKPRASTTPDHPKALKGPSPEHHKPLCKGSPEQQRHPHAGSSPEALPKHVLSGSPEHLQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEHLKQHYGGSPDHKHVGGGGGGGGGGGGGGGMLKIDS*