Part of scaffold_1444 (Scaffold)

For more information consult the page for scaffold_1444 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDSR ENSTTRG00000005087 (Bottlenosed dolphin)

Gene Details

3-ketodihydrosphingosine reductase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004857, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 98.8%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0364)

BT.53389 ENSBTAG00000007723 (Cow)

Gene Details

3-ketodihydrosphingosine reductase precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000010155, Cow)

Protein Percentage 92.83%
cDNA percentage 90.45%
Ka/Ks Ratio 0.15016 (Ka = 0.0429, Ks = 0.2858)

KDSR  (Minke Whale)

Gene Details

3-ketodihydrosphingosine reductase

External Links

Gene match (Identifier: BACU014914, Minke Whale)

Protein Percentage 83.92%
cDNA percentage 87.38%
Ka/Ks Ratio 0.73086 (Ka = 0.1287, Ks = 0.1761)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1104 bp    Location:197210..231906   Strand:+
>bmy_17207
ACACCGGGCTCCCACTGCGCGCGGCCGCGCGTGATCGCCGGCGCAGCGGAGCCCTGCGCGCCTGTGCCTGCGCCGCCCGCCCCAGGCCCCGGCCTCGGCCGAGCGATGCTGCTGCTGGCGGCCGCCTTCCTCGTGGCGTTCGTGCTGCTGCTCTACATGGTGTCTCCGCTCATCAGCCCCAAGCCCCTCGCCCTGCCTGGGGCGCATGTGGTGGTTACAGGAGGCTCCAGTGGCATCGGAAAGTGCATTGCTATTGAGTGCTATAAACAAGGAGCTTTTATAACTCTGGTTGCACGAAATGAGGACAAACTGTTGCAGGCAAAGAAAGAAATCGAAAAACACTCTATTAATGATAAACAGGTGGTGCTTTGTATATCAGTTGATGTATCTCAAGACTATAGCCAAGTAGAGAATGTCATAAAACAAGCACAGGAGAAACTGGGCCCAGTGGACATGCTTGTAAACTGTGCAGGAATGTCACTTGCAGGAAAATTTGAAGATCTTGAAGTTAGTACTTTTGAAAGATTAATGAGCGTCAACTACCTGGGCAGCGTGTACCCCAGCCGAGCGGTGATCACCACCATGAAGGAGCGCCGYGTGGGCAGGATTGTCTTCGTGTCCTCCCAGGCGGGGCAGTTAGGCTTATTTGGTTTCACAGCCTACTCTTCGTCCAAGTTTGCCATCAGGGGATTGGCAGAAGCTTTGCAGATGGAGGTGAAGCCCTATAATGTTTATGTCACAGTTGCCTACCCACCAGACACAGACACCCCCGGGTTTGCAGAAGAAAACAAAACCAAGCCTTTGGAGACTCGTCTTATTTCAGAGACCACATCTGTTTGCAAACCAGAACAAGTGGCCAAACAAATTGTTAAAGATGCCATACAAGGAAATTTCAACAGTTCCATCGGCTCAGATGGGTACATGCTCTCATCCCTGACCTGTGGAATGGCTCCGGTAACTTCCATCACTGAAGGGCTCCAGCAGGTAGTCACCATGGGCCTCTTCCGTACGATTGCTTTGTTTTACCTTGGAAGCTTCGACAGTATAGTTCGTCGCTGCATGATGCAGAGAGCGAAATCTGAAATTGCAGACAAAACTGCCTAA

Related Sequences

bmy_17207T0 Protein

Length: 368 aa      View alignments
>bmy_17207T0
TPGSHCARPRVIAGAAEPCAPVPAPPAPGPGLGRAMLLLAAAFLVAFVLLLYMVSPLISPKPLALPGAHVVVTGGSSGIGKCIAIECYKQGAFITLVARNEDKLLQAKKEIEKHSINDKQVVLCISVDVSQDYSQVENVIKQAQEKLGPVDMLVNCAGMSLAGKFEDLEVSTFERLMSVNYLGSVYPSRAVITTMKERRVGRIVFVSSQAGQLGLFGFTAYSSSKFAIRGLAEALQMEVKPYNVYVTVAYPPDTDTPGFAEENKTKPLETRLISETTSVCKPEQVAKQIVKDAIQGNFNSSIGSDGYMLSSLTCGMAPVTSITEGLQQVVTMGLFRTIALFYLGSFDSIVRRCMMQRAKSEIADKTA*