Part of scaffold_1484 (Scaffold)

For more information consult the page for scaffold_1484 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNGB1 ENSTTRG00000008385 (Bottlenosed dolphin)

Gene Details

cyclic nucleotide gated channel beta 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007963, Bottlenosed dolphin)

Protein Percentage 79.96%
cDNA percentage 84.43%
Ka/Ks Ratio 0.60209 (Ka = 0.1083, Ks = 0.1799)

CNGB1 ENSBTAG00000005702 (Cow)

Gene Details

cyclic nucleotide-gated cation channel beta-1 isoform c

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032365, Cow)

Protein Percentage 78.08%
cDNA percentage 82.66%
Ka/Ks Ratio 0.3757 (Ka = 0.1531, Ks = 0.4075)

CNGB1  (Minke Whale)

Gene Details

cyclic nucleotide gated channel beta 1

External Links

Gene match (Identifier: BACU001824, Minke Whale)

Protein Percentage 86.78%
cDNA percentage 90.31%
Ka/Ks Ratio 0.61932 (Ka = 0.0937, Ks = 0.1513)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3816 bp    Location:159614..87735   Strand:-
>bmy_17211
ATGCTGGGCTGGGTCCAGAGGGTGCTGCCTCAGCCCCCAGGGACACCAGTGAAGACCAAGAGAGAGGAGGAGGAGGGGGCAGAACCGGAGCCAGAGTTGGAGCCGGAGCCTGAAACAGCCCCTGAGGAGACTGAGCTAGAGGAAGAGTTCCTGCCACCTGAGGAGGCCTGCGTGGGGAAGGAAGTGGCTGAGGCTGATCCGGGCCCTCAGGGAGGCTGCCCCTTCTCCACCCACATCCCTCCAGGCTCAGGTCGCTGTGGTTCCGGAAGCGAACAGTGGTCCCAGCAGCCAGGTGCTGACCTGGCTCAGAAAGGGTGTGGAGAAGGTCGTTCCGCAGCCCGTCCACAGTGGCAGGCCTGCCCAGAGCACCGCTGCTGGCTTGGAGGGTCCAGCTCAGATGGACACAGTGAGGCCCCCAGGGCCCAAGACAATGGGCCCAGGCCCTGGCTGCTCAGGTGGCTTGAGCAGAATCTGGAGAAAATGCTGCCTCAGCCTCCGAAAACCTCCGAGGGCTGGAGAGATGAGCCTGCAGATGCCGCCTTGGGTCCAGAGCCCCCAGGACCCCCCTTGGAAATGGAGCCCGTGCCGCAGGCCCAGGAGAGCCCCTCCCTGCCTGCTCCTGCCCCTCCGAAGCCCGAGGAGGAGCCGACTCCAGAGCCCCAGCCTGGCATCCAGGCCTCCTCCCTGCCGCCCCCACAGGACTCTGCCAGGTTGATGGCGTGGCTCCTGCACAGGCTGGAGATGGCCCTGCCACAGCCAGTGATCCGTGGGAAGGCTGGGGAGCAGGAGCCTGACTCCCCTGTGACATGTGACGTGCAGAGCATCAGCATCCTCCCGGGAGAGCAAGAGGAGCCCAATCTCRTCCTAGAAGATGTTGACCCTCCCTGGGAAGAAGATGAGCATCGGGAGGTGAGCAGCAGCCCACAGGGCGCAGAGGCAGCTTCCGCTGATGAAGAGGAGAGCGAGGTGGCGGAGCAGATGCCCAGGTGGGAGCCAGAGAAAGCCCTGAAAAAAGCAGTGCTTGGGAAGATAACAGGCACATGGAGCTGCAGGAGGAGGCCGCGGCCACCAGCTCAGGAGTGGCTGGCATGGGCGTGGCGGTCAGAGGGCCCTGGGCTCTGCATCGTTGTGCCCCCTGCATGGATCTCTCCTGTGGGCCCTGTTGGGAGGCAAGGCTTCCAGAGGTCCCTCCACACAGGCTTTCTGTGGCTTCCCTGTAGAACACAGCAAGGCCCTGGGACCTGGCTTCTCTCTGACGCTGTGCCCTCCTTCCTCTCCCCAGTACCTGCCACGGAAGAGCACCCGGAAGTGCAGGTGGAAGACGCTGTTGCTGACAGCCAGCCCCTCTACGAGGAGGAGAATCCACCCTCTCCCGTGCCGCTGCCCCCGTCTCCTGCCGAATCCGACACACCTGGGCTGGAAGGGTGGTGTGATGGAGAAGGGGACGGGGTGGACTGGGGAGGGCAGTGCCCTCAGACTGGGAGGAAGAGGCTGTGCTCCCAAGATGATGAGGCTGAAGAGCTCAAGATRCTGTCACCGGCCRTATCCCCCGTGGTCGCTTGGTCGGACCCTACCAGCCCGCAGGGCACTGATGACCAGGACCGCGCAGCCTCCACAGCCAGCCAGACCGGCACCCTCATCAACGACCGGCTCCAGGAGCTGGTGAAGCTTTTCAAGGAGCGGACGGAGAAGGTGAAGGAGAAGCTCATCGACCCTGATGTCACCTCTGATGAAGAGAGCCCCAAGCCCTCCCCAGCCAAGAAAGCCCCAGAGCCGGCCCTGKATGTGAAGCCAGCTGAAGCGGGGCAGGTGGARGAGGAACACTATTGTGAAATGCTCTGCTGCAAGTTCAAACGCCGCCCCTGGAAGAAGTACCAGTTTCCCCAGAGCATCGACCCGCTGACCAACCTGATGTACATCCTGTGGCTGTTCTTCGTGGTGCTGGCCTGGAACTGGAACTGCTGGCTGATTCCCGTGCGCTGGGCCTTCCCCTACCAGATGCCGGACAACATCCACCTCTGGCTGCTGATGGATTACCTGTGTGACCTCATCTACCTCCTGGACATCACCGTGTTCCAGCTGCGTCTGCAGTTTGTCAGAGGCGGGGACGTCATTACAGACAAAAAGGAGATGCGCAACAATTATCTGAAATCTCAGCGCTTTAAGATGGATATGCTCTGCCTCTTGCCCTTGGACTTTCTCTACTTGAAATTCGGTGTGAATCCCCTCCTGCGCTTGCCCCGCTGTTTGAAGTACATGGCCTTCTTTGAGTTTAACGAGCGCCTGGAATCCATCCTCAGCAAAGCCTACATTTACAGGGTTATCAGGACCACAGCCTACCTGCTCTACACTTTACATGTGAACTCATGTCTGTATTACTGGGCTTCAGCCCATCAGGGCCTTGGCTCCACTCACTGGGTTTACGATGGCATGGGAAACAGTTACATTCGCTGTTACTACTGGGCTGTGAAGACCCTCATCACCATCGGCGGCCTGCCCGACCCCAAGACGCTCTTTGAAATTGCCTTCCAGGGTCTGAACTATTTCACAGGTGTCTTCGCTTTCTCCGTGATGATCGGACAGATGAGAGACGTGGTGGGGGCCGCTACGGCGGGAAAGACCTACTACCGCAACTGTATGGACAGCACAGTGAAGTACATGAACTTCTACAAGATCCCCAGGTCCGTGCAGAACAGGGTCAAGACCTGGTATGAGTACACCTGGCACTCCCAAGGCATGCTGGACGAGTCAGAGCTGATGGTGCAGCTTCCAGATAAGATGCGGATGGACCTCGCCATCGATGTGAACTATGACATCGTCAGCAAAGTGGCACTCTTCCAGGGCTGTGACCGGCAGATGATCTTCGACATGCTGAAGAGGCTTCGCTCTGTTGTCTACCTGCCCAACGACTACGTGTGCAAGAAGGGGGAGATAGGCCGGGAGATGTACATCATCCAGGCGGGGCAGGTGCAGGTCTTGGGTGGCCCGGATGGGAAGTCCGTACTGGTGACGCTGAAAGCTGGATCTGTGTTTGGAGAAATAAGGTCAGAACGGGGTGAAACAAGGGGACCTCGGCAAAGGCTGGGGAAGGGGGGGATGGCCAGTGGGTGGGACCACGTCCTCAAGGGCCTTTCGGTGGGTCTGAGGAAACCGCTATGCATGCAGCACTGGCACCTGCTGACATACGCAAGCTTGCTGGCTGTTGGGGGCGGGAACCGGCGCACGGCTAACGTGATAGCCCACGGGTTTACCAACCTCTTCATTCTGGATAAGAAGGACCTGAATGAAATTTTGGTGCATTATCCTGAGAGAATGCTGAGAAATAACAACAAGCCCAAGGAGCAGAGTGTACTCATCCTTCCTCCACGGGCAGGCACCCCCAAGCTCTTCAGTGCCGCCCTGGCTGCAGCAGGAAAGATGGGTGCCAAGGGGGCCAAAGGTGGCAAGCTCGCCCACCTCAGGGCGCGACTCAAGGAGCTGGCTGCGCTGGAGGCGGCTGCAAGACAGCAGCAGGTGCTGGAACAGGCCAAGAGCTCGGAAGACGCAGCGGGAGAGACAGGATCAGCTACCCCAAAACAGCCCGCGGCCCCGGAGACCCCGGCCCCAGGCTCTCTGCCACCTGCATCCCAGGGGAGGTCCGAGGGAGAAGAGGGGGGCGCGGCCTGGCCCGAGGAGGGCTCGGTGCGGATCCACATGAGCCCAGGCCCGGATCCCGGCGAACAGATCCTGTTGGTGGAGATCCCCGAGAAGGAGGAGAAGGAGGAGGAGAAGGAGGAGAAGGAGGAGGAGAAAAAGGAGAAGAAAGAGGAGAAGGAG

Related Sequences

bmy_17211T0 Protein

Length: 1272 aa      View alignments
>bmy_17211T0
MLGWVQRVLPQPPGTPVKTKREEEEGAEPEPELEPEPETAPEETELEEEFLPPEEACVGKEVAEADPGPQGGCPFSTHIPPGSGRCGSGSEQWSQQPGADLAQKGCGEGRSAARPQWQACPEHRCWLGGSSSDGHSEAPRAQDNGPRPWLLRWLEQNLEKMLPQPPKTSEGWRDEPADAALGPEPPGPPLEMEPVPQAQESPSLPAPAPPKPEEEPTPEPQPGIQASSLPPPQDSARLMAWLLHRLEMALPQPVIRGKAGEQEPDSPVTCDVQSISILPGEQEEPNLXLEDVDPPWEEDEHREVSSSPQGAEAASADEEESEVAEQMPRWEPEKALKKAVLGKITGTWSCRRRPRPPAQEWLAWAWRSEGPGLCIVVPPAWISPVGPVGRQGFQRSLHTGFLWLPCRTQQGPGTWLLSDAVPSFLSPVPATEEHPEVQVEDAVADSQPLYEEENPPSPVPLPPSPAESDTPGLEGWCDGEGDGVDWGGQCPQTGRKRLCSQDDEAEELKXLSPAXSPVVAWSDPTSPQGTDDQDRAASTASQTGTLINDRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPALXVKPAEAGQVEEEHYCEMLCCKFKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQMPDNIHLWLLMDYLCDLIYLLDITVFQLRLQFVRGGDVITDKKEMRNNYLKSQRFKMDMLCLLPLDFLYLKFGVNPLLRLPRCLKYMAFFEFNERLESILSKAYIYRVIRTTAYLLYTLHVNSCLYYWASAHQGLGSTHWVYDGMGNSYIRCYYWAVKTLITIGGLPDPKTLFEIAFQGLNYFTGVFAFSVMIGQMRDVVGAATAGKTYYRNCMDSTVKYMNFYKIPRSVQNRVKTWYEYTWHSQGMLDESELMVQLPDKMRMDLAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEIRSERGETRGPRQRLGKGGMASGWDHVLKGLSVGLRKPLCMQHWHLLTYASLLAVGGGNRRTANVIAHGFTNLFILDKKDLNEILVHYPERMLRNNNKPKEQSVLILPPRAGTPKLFSAALAAAGKMGAKGAKGGKLAHLRARLKELAALEAAARQQQVLEQAKSSEDAAGETGSATPKQPAAPETPAPGSLPPASQGRSEGEEGGAAWPEEGSVRIHMSPGPDPGEQILLVEIPEKEEKEEEKEEKEEEKKEKKEEKE