Sequence detailsbmy_17217 (Coding sequence)

Part of scaffold_1484 (SequenceType object (1))

For more information consult the page for scaffold_1484 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

C16orf80ENSTTRG00000008438 (Bottlenosed dolphin)

Gene Details

chromosome 16 open reading frame 80

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007999, Bottlenosed dolphin)

Protein Percentage 88.54%
cDNA percentage 90.45%
Ka/Ks Ratio 0.65855 (Ka = 0.0941, Ks = 0.1429)

C18H16orf80ENSBTAG00000013874 (Cow)

Gene Details

UPF0468 protein C16orf80 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000018422, Cow)

Protein Percentage 88.54%
cDNA percentage 87.5%
Ka/Ks Ratio 0.27722 (Ka = 0.0921, Ks = 0.3322)

Additional orthologs identified in other species via the OPTIC pipeline.

C16orf80 (Human)   Gtl3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 603 bp    Location:293626..281473   Strand:-
Raw sequence 
>bmy_17217
ATGTTCAAGAACACGTTCCAGAGCGGCTTCCTTTCTATCCTCTACAGCATTGGCAGCAAGCCCCTGCAAATCTGGGACAAAAAGATCTGCCTTCCAATTTATCCTCTTGGACTGAGTGTTATGGCTGTGCATACCACAAAGGAAAAGATAAGTAGTGTGTTTATTGGTGTTTCCTCTTTCTACAGCACCACATATATCACATGTCCTGCAGACCCAAAGAAAACATTGGGAATTAAACTTCCCTTCCTTGTCATGATTATCAAAAACCTGAAGAAATATTTTACCTTTGAAGTACAGGTACTAGATGACAAGAATGTGCGTCGGCGGTTTCGGGCAAGTAACTACCAGAGCACCACCAGGGTCAAACCCTTCATCTGTACCATGCCCATGCGGCTGGATGACGGATGGAACCAGATTCAGTTCAACCTGTCAGACTTCACTCGGCGGGCATATGGCACAAATTACATTGAGACCCTCAGGGTGCAGATCCATGCAAACTGCCGCATCCGACGGGTTTACTTCTCAGACAGACTCTACTCAGAAGACGAACTGCCAGCGGAGTTCAAACTGTATCTCCCAGTTCAGAATAAGGCAAAGCAATAA

Related Sequences

bmy_17217T0 SequenceType object (3)

Length: 201 aa      View alignments
>bmy_17217T0
MFKNTFQSGFLSILYSIGSKPLQIWDKKICLPIYPLGLSVMAVHTTKEKISSVFIGVSSFYSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ*