Part of scaffold_1484 (Scaffold)

For more information consult the page for scaffold_1484 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CCDC113 ENSTTRG00000008447 (Bottlenosed dolphin)

Gene Details

coiled-coil domain containing 113

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008009, Bottlenosed dolphin)

Protein Percentage 88.27%
cDNA percentage 93.16%
Ka/Ks Ratio 1.03143 (Ka = 0.0729, Ks = 0.0707)

CCDC113 ENSBTAG00000014144 (Cow)

Gene Details

Coiled-coil domain-containing protein 113

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018801, Cow)

Protein Percentage 87.71%
cDNA percentage 90.1%
Ka/Ks Ratio 0.30831 (Ka = 0.0707, Ks = 0.2295)

CCDC113  (Minke Whale)

Gene Details

coiled-coil domain containing 113

External Links

Gene match (Identifier: BACU001817, Minke Whale)

Protein Percentage 97.43%
cDNA percentage 98.0%
Ka/Ks Ratio 0.27641 (Ka = 0.0118, Ks = 0.0428)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1053 bp    Location:380126..408643   Strand:+
>bmy_17219
ATGACGGACGAGGACTCTGAGACTTCTGCCAGCGAGGCGCAAGCCCAGAATGAGAGCGAGCTGCCTGTTATTCAGCTGTGTGGGCTGGTGGAAGAGCTCAGCTATGGAAACTCTGCTCTCAAAACTGAGACAGAGATGTTTGAAAAATATTACAATAAATTGGAGCCCAGGGACCAGCGACCTCCACGATTATCAGAACTTAAAATATCAGGAGCAGAAATTGCACAGTTACGAGGCAGGCGTAGATCCAAATCCCGCATAAGTCTGGGACGTGTAACAGGCCTCAGCGTGGAYCAGAAATTCAAGCTTGTGCAAAAAGAGCTGGACGACACAAAGAGTGAAATAAGGCACATAAGGGCAAACGCCGAGAGGGACCTGCAGCATCACGAGGCTATCGTTGAGGAAGCTGAAATTCGGTGGACCGAAGTTCAGAGAGAAGTGCATGAGTTTGAAAAAGATATTCTAAAGACCATATCCAAGAAGAAAGGGAGTAGTTTGGCCACTCAGAAAGTGATGAAGTACATTGAGGACATGAACCGCCGGAGGAAGGAAGAGGTGGGAGAGGCCCTCCACGATGTTGACTTTCAGCAGCTGAAGATCGAGAATGCTCAGTTTTTAGAGACGATTGAAGCAAAGAATCAAGAACTGATCCAGCTGAAGCTGGTATCCGGAAACACCCTGCAGATCCTTAACACATACAAAAGCAAGCTACACCGAGCCATGGAAATGTCCCTCAATCTGGACAAAGAGTTCTTGTTGAGAAAAGAGTTACTCGAAAAAGTTGAAAAAGAAACCCTGCAAGTAGAGGAGGACCGGGCCAAGGCCATGGCTCTGAACAAGCAGCTCCGGAAGCAGCTGTCTGAGTTCCGAGCGCCACAGGTGATGATGTACGTCCGGGAGAAGATCCGAAACAGGGACCTGGAGAAGACCATCAGGATGTGGGAGAGGAAAGTGGAGATTGCAGAGATGTCCTTAAAAGGCTACCGCAAGGCTTGGAATAAAATGAAAATCACCAATGAGCAGTTGCAGGCAATTTGCCCCGCTGGGAAATAG

Related Sequences

bmy_17219T0 Protein

Length: 351 aa      View alignments
>bmy_17219T0
MTDEDSETSASEAQAQNESELPVIQLCGLVEELSYGNSALKTETEMFEKYYNKLEPRDQRPPRLSELKISGAEIAQLRGRRRSKSRISLGRVTGLSVDQKFKLVQKELDDTKSEIRHIRANAERDLQHHEAIVEEAEIRWTEVQREVHEFEKDILKTISKKKGSSLATQKVMKYIEDMNRRRKEEVGEALHDVDFQQLKIENAQFLETIEAKNQELIQLKLVSGNTLQILNTYKSKLHRAMEMSLNLDKEFLLRKELLEKVEKETLQVEEDRAKAMALNKQLRKQLSEFRAPQVMMYVREKIRNRDLEKTIRMWERKVEIAEMSLKGYRKAWNKMKITNEQLQAICPAGK*