Sequence details bmy_17235 (Coding sequence)

Part of scaffold_1495 (Scaffold)

For more information consult the page for scaffold_1495 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMARCAD1 ENSTTRG00000000226 (Bottlenosed dolphin)

Gene Details

SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000211, Bottlenosed dolphin)

Protein Percentage 95.25%
cDNA percentage 95.72%
Ka/Ks Ratio 0.40273 (Ka = 0.0353, Ks = 0.0877)

SMARCAD1 ENSBTAG00000017061 (Cow)

Gene Details

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000045084, Cow)

Protein Percentage 90.55%
cDNA percentage 90.42%
Ka/Ks Ratio 0.24713 (Ka = 0.0681, Ks = 0.2754)

SMARCAD1  (Minke Whale)

Gene Details

SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1

External Links

Gene match (Identifier: BACU010607, Minke Whale)

Protein Percentage 94.39%
cDNA percentage 94.91%
Ka/Ks Ratio 0.37776 (Ka = 0.0411, Ks = 0.1088)

Additional orthologs identified in other species via the OPTIC pipeline.

SMARCAD1 (Human)   Smarcad1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3219 bp    Location:299807..457456   Strand:+
Raw sequence 
>bmy_17235
ATGCTCACTCCCGCTCTGAGTTATGTCCCAGAAGAAGGCAAGAGAATTTACAGAGGTTTAAAAGAATTATTTAAGGGGAGCTTTTCCAAAAGGGTGCTTTTTCCTAATGACATAATTTTTAATGTGACTCCTTTGAAATATAAGAAGTACCGAAGAATCACCAAATCTAATGCAAAGACCAGTGAATTCTGCTACAGGTACAATTTCCCTGAAAATGGAAGGGCCGAAGATAGTTCATTTAAAGGTCCCATCCCCACGAGTGCTGAAGAGGAGAATGCTGAAGGGGAAGTTAGCAGGGCAGGCACCCCTGATTCAGATATAACTGAAAAAACAGAAGATTCTAGTGTTCCAGAAACCCCAGAAAATGAAAGAAAAGCAAGTATATCATCGTATTTCAAGAATCAAAGAGGAATTCAATATATTGATTTGTCTTCAGATAGTGAAGATGTTGTTTCCCCAGATTGCTCCAGTACAGTTCAAGAGAAAAAATTCAGTAAAGACACAGTGATTATAGTYTCTGAGCCATCTGAAGATGAAGAGTCCCAAGGCCTTCCTACCATGGCAGGTAGAAATAATAATGATATTTCAGAATTGGAAGACCTTTCGGAATTGGAAGACCTTAAAGATGCTAAACTTCAGACCTTGAAGGAACTTTTTCCGCAGAGAAGTGACAATGATTTACTTAAGATCAAATCTCATATCAGTGAAGTTTTGCGAGAAGGTGGTGGACCCAGGAAAAGAAAATTATCTTCTTCTTCAGAGCCATTTGAGGAAGATGAATTTAATGATGATCAATCTATGAAAAAGAAGAGATTGGATCAAGGAGAGGAATCAAATGAGTCTGCAGAATCTAGCAGTAATTGGGAAAAACAGGAAAGTATTGTGTTGAAATTGCAAAAGGAATTTCCCAATTTTGATAAAGAGGAGTTAAGGGAAGTACTCAAGGAACATGAATGGATGTACACAGAGGCTTTAGAATCTTTAAAAGTGTTTGCGGAAGACCAAGATATGCAATATGCTTCACCAAGTGAGTTTCCAAATGGAAAAGAAATTTCTTCAAGAAGTCAAAATTATCCTAAAAATGCAGCTAAAACAAAACTGAAACAGAAATGTTCCATGAAACCACAAAATGGTTTTAACAAGAAACGTAAAAAAAATGTATTTAATCCTAAAAGAGTTATTGAAGACTCTGAATATGATTCAGGTTCTGATGTCGGTAGTTCATTAGACGAGGACTATAGTAGTGGTGAAGAAGTGATGGAGGATGGCTATAAAGGTAAAATTCTTCACTTCCTTCAAGATGCTTCAATTGGTGAACTTACTTTGATTCCTCAGTGTTCTCAGAAAAAGGCTCAGAAGATAACAGAACTCCGGCCCTTTAATAGTTGGGAAGCTCTGTTCACAAAGATGTCCAAAACGAATGGCTTATCAGAAGATTTGATATGGCACTGTAAAACACTGATCCAAGAAAGGGATGTAGTTATAAGGCTTATGAACAAATGTGAAGACATTTCAAATAAATTGACAAAACAAGTTACCATGCTCACTGGAAATGGAGGTGGATGGAACATAGAACAACCCTCCATTCTAAACCAAAGTTTGTCACTCAAGCCCTATCAGAAGGTTGGTTTGAATTGGCTGGCATTGGTACATAAACATGGACTTAATGGCATTTTGGCAGATGAAATGGGCCTGGGAAAAACTATTCAAGCGATTGCCTTCCTAGCGTACCTCTATCAGGAGGGTAATAATGGTCCTCATTTGATTGTTGTTCCAGCATCAACTATAGATAACTGGCTAAGGGAAGTTAATTTATGGTGCCCCACTTTAAAGGTGCTCTGTTACTATGGTTCTCAAGAAGAACGTAAACAGATTAGATACAACATTCATAGTAAATACGAAGAATACAATGTAATCGTGACCACGTATAATTGTGCAATCAGCAGTTCTGATGATCGTAGTCTGTTTCGTCGGCTGAAGTTGAATTACGCAATTTTTGATGAGGGCCATATGCTGAAGAATATGGGCTCCATCCGCTACCAGCACCTTATGACAATTAATGCAAATAACCGTTTGCTGCTCACAGGCACACCTGTGCAGAATAACCTGTTAGAACTCATGTCRCTGTTGAATTTTGTTATGCCGCACATGTTCAGTAGTAGCACCAGTGAAATACGAAGAATGTTTTCTTCTAAGACAAAATCAGCAGATGAGCAAAGTATATACGAAAAGGAGAGAATAGCACATGCAAAACAAATTATAAAACCATTTATTCTCAGAAGAGTAAAAGAAGAGGTTCTCAAGCAGCTACCCCCCAAGAAAGATCGAATTGAGTTGTGTGCAATGTCAGAGAAGCAGGGGCAACTCTATTTGGGTCTTTTCAACAGATTGAAAAAATCTATCAATAACATGGAAAAAAACACAGAAATGTGCAATGTCATGATGCAATTGAGAAAAATGGCCAATCATCCTTTATTACATCGCCAGTATTACACAGCTGAAAAACTCAAGGAAATGTCTCAGCTTATGCTAAAGGAACCTACACATTGTGAGGCTAACCCTGACCTGATCTTTGAAGATATGGAAGTTATGACAGACTTTGAATTACATGTACTTTGTAAACAGTATCGACACATTAATAACTTCCAGTTAGACATGGACTTGATTTTAGATTCTGGAAAATTTCGAGTTTTAGGCTGCATCTTGTCTGAATTGAAACAGAAGGGTGATAGAGTTGTATTATTCAGCCAGTTCACCATGATGCTGGATATTTTAGAGGTTCTCTTAAAACATCATCAGCATAGGTACCTCAGATTAGATGGAAAGACTCAGATTTCTGAAAGGATTCATCTAATTGACGAGTTTAATACCGATATGGATATCTTTGTGTTTCTGCTGTCAACAAAAGCTGGTGGCCTAGGAATAAACCTGACTTCAGCAAATGTTGTTATACTTCACGATATTGACTGTAATCCTTACAATGACAAACAAGCAGAAGATAGATGCCATAGAGTAGGCCAGACTAAAGAAGTACTAGTTATAAAATTAATAGGCCAAGGGACAATCGAAGAATCCATGCTAAAAATTAATCAACAGAAATTGAAACTAGAACAAGATATGACCACAGTAGATGAAGGTAAGTTATTTGTCAGCATAAACTTTATTTATATGAAAAGGCATCAACTTAGCAGTAGCAAGGGGATAATAAAGATGGTTTGA

Related Sequences

bmy_17235T0 Protein

Length: 1073 aa      View alignments
>bmy_17235T0
MLTPALSYVPEEGKRIYRGLKELFKGSFSKRVLFPNDIIFNVTPLKYKKYRRITKSNAKTSEFCYRYNFPENGRAEDSSFKGPIPTSAEEENAEGEVSRAGTPDSDITEKTEDSSVPETPENERKASISSYFKNQRGIQYIDLSSDSEDVVSPDCSSTVQEKKFSKDTVIIVSEPSEDEESQGLPTMAGRNNNDISELEDLSELEDLKDAKLQTLKELFPQRSDNDLLKIKSHISEVLREGGGPRKRKLSSSSEPFEEDEFNDDQSMKKKRLDQGEESNESAESSSNWEKQESIVLKLQKEFPNFDKEELREVLKEHEWMYTEALESLKVFAEDQDMQYASPSEFPNGKEISSRSQNYPKNAAKTKLKQKCSMKPQNGFNKKRKKNVFNPKRVIEDSEYDSGSDVGSSLDEDYSSGEEVMEDGYKGKILHFLQDASIGELTLIPQCSQKKAQKITELRPFNSWEALFTKMSKTNGLSEDLIWHCKTLIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGNNGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRYNIHSKYEEYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQGQLYLGLFNRLKKSINNMEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYRHINNFQLDMDLILDSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLIGQGTIEESMLKINQQKLKLEQDMTTVDEGKLFVSINFIYMKRHQLSSSKGIIKMV*