Sequence details bmy_17236 (Coding sequence)

Part of scaffold_1495 (Scaffold)

For more information consult the page for scaffold_1495 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HPGDS ENSTTRG00000000228 (Bottlenosed dolphin)

Gene Details

hematopoietic prostaglandin D synthase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000212, Bottlenosed dolphin)

Protein Percentage 97.93%
cDNA percentage 97.47%
Ka/Ks Ratio 0.10847 (Ka = 0.009, Ks = 0.0825)

HPGDS ENSBTAG00000017073 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022700, Cow)

Protein Percentage 93.79%
cDNA percentage 93.33%
Ka/Ks Ratio 0.16588 (Ka = 0.0305, Ks = 0.184)

Additional orthologs identified in other species via the OPTIC pipeline.

HPGDS (Human)   Hpgds (Mouse)  

Genome Location

Sequence Coding sequence

Length: 438 bp    Location:489654..464308   Strand:-
Raw sequence 
>bmy_17236
ATGCCAAACTACAAACTCACTTATTTTAATATGAGGGGGAGAGCAGAAATTATTCGTTACATATTTGCATATTTGGACATAAAGTATGAAGACCACAGAATAGAACAATCTGATTGGCCTGAAATCAAGTCAACTCTTCCATTTGGCAAAATTCCCATTTTGGAAGTCGATGGCTTGAACCTTCACCAGAGCCTAGCGATAGCAAGATATCTGACCAAAAACACAGATTTGGACACATACTTAGGGGAAAACGAGTGGTTTATTGGTAACTCTGTAACTTGGGCAGATTTCTACTGGGAAATTTGCAGTACCACACTTTTGGTCTTTAAACCTGATTTGTTGGACAACCATCCCAGGCTGGTGACATTACGTAAGAAAGTCCAAAGCATTCCTGCCATCGCCAACTGGATAATGMGAAGGCCCCAAACCAAACTCTAG

Related Sequences

bmy_17236T0 Protein

Length: 146 aa      View alignments
>bmy_17236T0
MPNYKLTYFNMRGRAEIIRYIFAYLDIKYEDHRIEQSDWPEIKSTLPFGKIPILEVDGLNLHQSLAIARYLTKNTDLDTYLGENEWFIGNSVTWADFYWEICSTTLLVFKPDLLDNHPRLVTLRKKVQSIPAIANWIMRRPQTKL*