Sequence detailsbmy_17269 (Coding sequence)

Part of scaffold_1492 (SequenceType object (1))

For more information consult the page for scaffold_1492 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MTPNENSTTRG00000016695 (Bottlenosed dolphin)

Gene Details

myotrophin

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000015827, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.29%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0217)

MTPNENSBTAG00000007806 (Cow)

Gene Details

Myotrophin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010269, Cow)

Protein Percentage 90.0%
cDNA percentage 88.79%
Ka/Ks Ratio 0.34267 (Ka = 0.0846, Ks = 0.2468)

MTPN (Minke Whale)

Gene Details

myotrophin

External Links

Gene match (Identifier: BACU020474, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 100.0%
Ka/Ks Ratio 99.0 (Ka = 0.0045, Ks = 0.0)

Additional orthologs identified in other species via the OPTIC pipeline.

MTPN (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 336 bp    Location:220777..252094   Strand:+
Raw sequence 
>bmy_17269
ATGGCAAAGAAAGGCGACATCATGAAGTTTTCCAGATGTGGGAAAGCGCTGGGAGAAGACGTCAACCGGACACTAGAAGGTGGAAGGAAGCCTCTTCATTATGCAGCAGATTGTGGGCAGCTTGAAATCCTGGAATTTCTGCTGCTGAAAGGAGCAGATATTAATGCTCCAGATAAACATCATATTACACCTCTTCTGTCTGCTGTCTATGAAGGTCATGTTTCCTGTGTGAAATTGCTTCTGTCAAAGGGTGCTGATAAGACTGTGAAAGGTCCAGACGGACTGACTGCCTTTGAAGCCACTGACAACCAGGCAATCAAAGCCCTTCTTCAGTGA

Related Sequences

bmy_17269T0 SequenceType object (3)

Length: 112 aa      View alignments
>bmy_17269T0
MAKKGDIMKFSRCGKALGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ*