Part of scaffold_1477 (Scaffold)

For more information consult the page for scaffold_1477 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTSH ENSTTRG00000016607 (Bottlenosed dolphin)

Gene Details

cathepsin H

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015744, Bottlenosed dolphin)

Protein Percentage 87.37%
cDNA percentage 88.62%
Ka/Ks Ratio 0.30225 (Ka = 0.0161, Ks = 0.0533)

CTSH ENSBTAG00000010992 (Cow)

Gene Details

Pro-cathepsin H Cathepsin H mini chain Cathepsin H Cathepsin H heavy chain Cathepsin H light chain

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014593, Cow)

Protein Percentage 90.78%
cDNA percentage 92.83%
Ka/Ks Ratio 0.1768 (Ka = 0.0419, Ks = 0.2369)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 882 bp    Location:56801..35043   Strand:-
>bmy_17284
ATGTGGGCCGTCCTGCCGCTGCTCTGCGCCGGAGCCTGGCTCCTGGGCCCCACCGCCTGCGGCGCCGCCGACCTGGCAGTGAGCTCCCTAGAGAAGTTTCACTTTAAGTCATGGATGGTGCAGCACCAAAAGAAATACAGCTCGGAGGAGTACCACCACAGGCTGCAGGCGTTTGTCAGCAACTGGAGGAAGATCAATGCCCACAACGCCGGGAACCACACATTCAAAATGGGACTGAACCAGTTTTCAGACATGAGCTTTGCTGAATTAAAACGCAAGTATCTTTGGTCAGAGCCTCAGAATTGCTCAGCCACCAAAGGTAACTACCTTCGGGGTACTGGTCCCTACCCACCCTCCATGGACTGGCGGAAAAAAGGAAATTTCGTCTCACCAGTGAAAAATCAGGGCAGCTGCGGCAGTTGCTGGACCTTCTCCACCACCGGGGCCCTGGAGTCTGCTGTCGCCATTGCAACTGGGAGGCTGCCCTCTTTGGCCGAGCAGCAGCTGGTGGACTGCGCCCAGAACTTCAACAATCACGGCTGCCAAGGGGGTCTCCCCAGCCAGGCCTTCGAGTACATCCGGTACAACAAGGGCATCATGGGTGAAGACACCTACCCCTACAAGGGCCAGGATGGTGACTGCAAGTTCCAGCCCAGTAAGGCCATTGCTTTTGTCAAGGATGTAGCCAACATCACAATGAACGACGAGGAGGCGATGGTGGAGGCGGTGGCCCTGTACAACCCTGTGAGCTTTGCCTTCGAGGTGACTCATGACTTTCTGATGTACAAAAAGGGCGTCTACTCCAGGTACTTCCTCATGGAGCGTGGGAAGAACATGTGCGGCCTGGCAGCCTGCGCCTCCTACCCCATCCCCCTGGTGTGA

Related Sequences

bmy_17284T0 Protein

Length: 294 aa      View alignments
>bmy_17284T0
MWAVLPLLCAGAWLLGPTACGAADLAVSSLEKFHFKSWMVQHQKKYSSEEYHHRLQAFVSNWRKINAHNAGNHTFKMGLNQFSDMSFAELKRKYLWSEPQNCSATKGNYLRGTGPYPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGRLPSLAEQQLVDCAQNFNNHGCQGGLPSQAFEYIRYNKGIMGEDTYPYKGQDGDCKFQPSKAIAFVKDVANITMNDEEAMVEAVALYNPVSFAFEVTHDFLMYKKGVYSRYFLMERGKNMCGLAACASYPIPLV*