Part of scaffold_1477 (Scaffold)

For more information consult the page for scaffold_1477 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TMED3 ENSTTRG00000016610 (Bottlenosed dolphin)

Gene Details

transmembrane emp24 protein transport domain containing 3

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015747, Bottlenosed dolphin)

Protein Percentage 98.61%
cDNA percentage 96.91%
Ka/Ks Ratio 0.0372 (Ka = 0.0058, Ks = 0.157)

TMED3 ENSBTAG00000000807 (Cow)

Gene Details

transmembrane emp24 domain-containing protein 3 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001068, Cow)

Protein Percentage 92.66%
cDNA percentage 90.83%
Ka/Ks Ratio 0.06507 (Ka = 0.0317, Ks = 0.4878)

TMED3  (Minke Whale)

Gene Details

transmembrane emp24 protein transport domain containing 3

External Links

Gene match (Identifier: BACU016014, Minke Whale)

Protein Percentage 97.56%
cDNA percentage 98.54%
Ka/Ks Ratio 0.34932 (Ka = 0.0108, Ks = 0.0309)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 840 bp    Location:371643..382664   Strand:+
>bmy_17287
TCCCGGGACCACCCTCGAGCGCGCGGCTGCGCGCTGAGCCTCCCGCCCTCCCGGAAGCGTAGCGCCCGGTTAGCGCCACGTCTGTCCCTGCGACTTATCCCTGGTCCCCCAGCCACCGTCCCACCCGCGAGGAGCGCACGCCCAAGCCGCGGCCCACGGGGCTGGACCGGGAGCATCATGGGCAGCGTGGCCTCGCGCTCCGCCTGCGCGCTGCCCCTTCTGCTGCTGCTGCTGCTGCTTCTCCAGGCGGAGCGGCCGCGGGGCGCGGAGCTCACCTTCGAGCTACCTGACAACGCCAAGCAGTGTTTCTACGAGGACGTGGAGCAGGGCGTGAAGTTCTCCCTGGATTACCAGGTCATCGCTGGAGGCCACTACGACGTTGACTGCTATATGGAGGACCCCCTGGGGAACACCATCTACAGGGAAACCAAGAAGCAGTATGACAGCTTCACACACCAGGCTGAGGTCAAGGGCGTTTATCAGTTTTGCTTCAGTAATGAGTTTTCCACCTTCTCTCACAAGACCGTCTACTTTGACTTTCAAGTGGGCGACGAGCCCCCCATTCTCCCAGACATGGGGAACAGAGTCACGGCTCTCACCCAGATGGAGTCCGCCTGTGTGACCATCCACGAGGCTCTGAAGACGGTGATTGACTCTCAGACGCATTACCGGCTCCGGGAGGCCCAGGACAGAGCCCGGGCCGAAGATCTGAATAGCCGAGTCTCTTACTGGTCTGTTGGTGAGACAATCGCGCTGTTCGTGGTCAGCTTCAGCCAGGTGCTGCTGCTTAAAAGCTTCTTCACAGAAAAACGACCCGTCAGCAGGATGGTCCACTCCTAG

Related Sequences

bmy_17287T0 Protein

Length: 280 aa      View alignments
>bmy_17287T0
SRDHPRARGCALSLPPSRKRSARLAPRLSLRLIPGPPATVPPARSARPSRGPRGWTGSIMGSVASRSACALPLLLLLLLLLQAERPRGAELTFELPDNAKQCFYEDVEQGVKFSLDYQVIAGGHYDVDCYMEDPLGNTIYRETKKQYDSFTHQAEVKGVYQFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMESACVTIHEALKTVIDSQTHYRLREAQDRARAEDLNSRVSYWSVGETIALFVVSFSQVLLLKSFFTEKRPVSRMVHS*