Part of scaffold_1497 (Scaffold)

For more information consult the page for scaffold_1497 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PHTF1 ENSTTRG00000009108 (Bottlenosed dolphin)

Gene Details

putative homeodomain transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008638, Bottlenosed dolphin)

Protein Percentage 96.01%
cDNA percentage 96.51%
Ka/Ks Ratio 0.32813 (Ka = 0.0248, Ks = 0.0756)

PHTF1 ENSBTAG00000019615 (Cow)

Gene Details

Putative homeodomain transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026132, Cow)

Protein Percentage 93.35%
cDNA percentage 92.9%
Ka/Ks Ratio 0.20254 (Ka = 0.0394, Ks = 0.1944)

PHTF1  (Minke Whale)

Gene Details

putative homeodomain transcription factor 1

External Links

Gene match (Identifier: BACU002691, Minke Whale)

Protein Percentage 96.77%
cDNA percentage 97.15%
Ka/Ks Ratio 0.35389 (Ka = 0.0211, Ks = 0.0597)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1581 bp    Location:259371..241170   Strand:-
>bmy_17292
ATGGGTCACATAAAGGCAGACTTGATTGATGTTGACTTAATCAGAGGCTCAACATTTGCCAAAGCCAAACCTGAAATTCCGTGGACATCTCTGACTCGGAAGGGGCTTGTTCGAGTTGTATTTTTTCCATTTTTCAGCAATTGGTGGATTCAGGTTACCTCTTTAAGAATCTTTGTTTGGCTGCTACTGCTTTACCTCATGCAAGTTATAGCACTCGTGTTCTATTTTATGATGCCTATTGTGAATGTAAGTGAAGTACTTGGACCCTTGTGCCTTATGCTACTCATGGGAACTGTCCACTGTCAAATTGTGTCTACTCAGATAACAAGGCCATCGGGAAACAATGGAAATCGGAGAAGAAGAAAATTACGAAAAACTGTAAATGGTGATGGGAGCCGAGAAAATGGAAATAACTCCTCTGATAAAGCCAGAGGAACAGAAACTTTGGAATCTGCACCCTTTAATGGTGGTTTTTGGGGGACTCTCTTTGGCAACAGGATGAAAAGAGTAAAATTAATATGTAGCAAAGGGACAGAGACTGACAATGACTCAGGTTGTCTGCATCCTATCATCAAGAAGAGACAGTGTCGACCAGAGATTAGAATGTGGCAAACAAGAGAGAAAGCAAAATTTTCAGATGGAGAAAAGGGATGCAGGGAGCCGTTCGGGCGTTTGGGTAATGGGATTTCAGATGATCTGTCAAGTGAGGATGATGGTGAAGCCCAGACACAGATGATGACACTGCGGAGGAGCGTGGAAGGGGCCTCAAGTGACAACGGCTGTGAAGTTAAGAATAGGAAATCAATACTTTCAAGGCACCTAAACACTCAGGTAAAGAAGACCACTTCCAAGTGGTGTCCTGTTGTGCGGGATTCAGATAGTCTGGCTGAATCAGAGTTTGAATCGGCAGCCTTCAGTCAGAACTCAAGTCCTGCCTCTGATCGAGTTAGTGCAATAATCTGGGAAGGGAATGAGTGCAAAAAGATGGATATGTCTGTGTTGGAAATAAGTGGCATCATCATGAGCAGGGTTAATGCGTATCAGCAAGGAGTAGGTTATCAGATGCTGGGAAATGTCGTCACCATCGGATTAGCATTTTTCCCTTTTTTACATCGACTGTTCCGAGAGAAGAGCCTTGACCAGCTAAAGTCCATCTCAGCTGAGGAGATCTTGACTCTCTTTTGTGGGGCACCACCTGTTACACCTATTATTATTTTGTCTATAATTAATTTTTTTGAACGACTGTGTCTTACTTGGATGTTTTTTTTCATGATGTGTGTGGCGGAGAGAACATACAAACAGAGATTTTTATTTGCAAAACTCTTCAGCCATATTACTTCTGCCAGGAAAGCTAGGAAATATGAAATACCTCATTTCAGACTTAAAAAGGTGGAGAACATTAAGATATGGTTATCATTGCGTTCCTTTCTAAAGAGACGGGGCCCGCAGCGATCAGTGGATGTGGTTGTGTCTTCTGTCTTCCTACTGACACTTTCCATTGCTTTCATTTGTTGTGCCCAGGTAAGAGTTTCAGATCGATTTCACTGGAAAATGGAATATAGAGCTCACTTTCTGTTTTAA

Related Sequences

bmy_17292T0 Protein

Length: 527 aa      View alignments
>bmy_17292T0
MGHIKADLIDVDLIRGSTFAKAKPEIPWTSLTRKGLVRVVFFPFFSNWWIQVTSLRIFVWLLLLYLMQVIALVFYFMMPIVNVSEVLGPLCLMLLMGTVHCQIVSTQITRPSGNNGNRRRRKLRKTVNGDGSRENGNNSSDKARGTETLESAPFNGGFWGTLFGNRMKRVKLICSKGTETDNDSGCLHPIIKKRQCRPEIRMWQTREKAKFSDGEKGCREPFGRLGNGISDDLSSEDDGEAQTQMMTLRRSVEGASSDNGCEVKNRKSILSRHLNTQVKKTTSKWCPVVRDSDSLAESEFESAAFSQNSSPASDRVSAIIWEGNECKKMDMSVLEISGIIMSRVNAYQQGVGYQMLGNVVTIGLAFFPFLHRLFREKSLDQLKSISAEEILTLFCGAPPVTPIIILSIINFFERLCLTWMFFFMMCVAERTYKQRFLFAKLFSHITSARKARKYEIPHFRLKKVENIKIWLSLRSFLKRRGPQRSVDVVVSSVFLLTLSIAFICCAQVRVSDRFHWKMEYRAHFLF*