Part of scaffold_1497 (Scaffold)

For more information consult the page for scaffold_1497 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPN22 ENSTTRG00000009173 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, non-receptor type 22 (lymphoid)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008710, Bottlenosed dolphin)

Protein Percentage 90.5%
cDNA percentage 94.9%
Ka/Ks Ratio 0.88054 (Ka = 0.0513, Ks = 0.0583)

PTPN22 ENSBTAG00000019617 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026136, Cow)

Protein Percentage 78.69%
cDNA percentage 89.07%
Ka/Ks Ratio 0.97766 (Ka = 0.1196, Ks = 0.1224)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1551 bp    Location:347473..327538   Strand:-
>bmy_17294
ATGCTAAAATCTCTCATGGCCATTGCGTCACTAAAAAACAATCTCTTACTTCTCTTGAAGATTCAAGCAAAGTATTCAGTTTCTAAGCAAAATCCCAATCAAGAAGCAGATTCTTATTCTCCTAATTTACCAAAAAGCATCATAAAAGAAGCAAAAGTGATGAACCAACAGAGCAAAGGAAGGATAAGGGTGAAAAGTGCAGAAGCTTCTTCCTTTGACCTCAGGATTTCTGAAATAAGTGAAAAGGAAGGGTTAGTAATGCACCCTTCTAAACAGAGCAGTTCTTTAGAGTTTTTGGAGCTAAATTGTGGTTGTAACAAAAATGCTGACACAACCATGAAATGGGAGAGAAACGTATTCCCAATAGGTGTGGAGCCTCTTCAGAAGCATCAAAGTTTGGACTTGAGCTCCATTTTGTTTGGAGTACGTCCTAACTCTAAACCTGTAAATGCAGCAGGAAGATGTTTTAATTTAAAGGGGCCAATAATGCGGACCAAATCAACTCCCTTTGAATTGATGCAACAGAGAGACACCAAAGAGTTGGACGTCGAGGAAAATTTTTATTTGGAATCTCACCCACACAATTCTTGTCTTGAGCRGGCTCGAAAAGTGATGCATGTTTCTTCAGCAGAACTGAATTATTCACCATCATATGACTCTAAGCATCAAATGTGCAATGCCTCTAATGCAAAGCAGCATGACTCTGGTGCTTTTAAAGTACTTTCTTACATGTCTTTAGTAGAAGATCCTTATTTTTCATCATTGTCTCCAAGTAGTGCTGGTTCTAAGATGTCTCTTGATTTACCTGAGAAGCAAGATGAAACTGTTTTACCTTGTTCTTCACTGCCAAAATCTTCTACAACCCTCTTTCCTTATTACAATTCATGTGATTCTTTAGCACTGAATCCTCCGACCAATTTCCCCCCACCACTGAACCAAGAGACAGCAGTAGTAGCAACTTCTCCAAGAATAAATGATGAAATTCCCCCTCCACTTCCTGAACGGACACCTGAATCTTTTATTGTGGTAGAGGAAGCTGGAGAATTCCCCCTGGATGTTCCCAAATCTTTATCTTCAGCTGTGAAGGTAAAAATCAGAACATCACTAGAATGTAGTAGAACATCTGAATCAAAGAAATTTGATGATTTGAGTGTAAAACCCCAGAGTCCCAAATCAGATCGACACCAAGATCGTTCTTCTTCCCTGCCACCTCCACTGCCAGAAAGAACCTTAGAGTCCTTCCTTGTTGCTGATGAAGATTGTATGCAGGCTCACCCTATAGAGACTTATTCTACTAGCTGTCCTAACACCATGGAAAATTCAACATCTTCAAAACAGACATTGAAGACTCCTGGAAAATGTTTCACAAGGAGTAAGAGTTTGAAAATTTTGCGAAACATGAAAAAGAGTATCTGTAATTCTTCCCCATCAAACAAGCCTGCAGACTCTGTTCAGTCAAATAACTCCAGCTCCTTTTTGAATTTTGGTTTTGCAAATCGTTTTTCAAAACCCAAAGGACCAAGGAACCCACCATCAACTTGGAATATTTAA

Related Sequences

bmy_17294T0 Protein

Length: 517 aa      View alignments
>bmy_17294T0
MLKSLMAIASLKNNLLLLLKIQAKYSVSKQNPNQEADSYSPNLPKSIIKEAKVMNQQSKGRIRVKSAEASSFDLRISEISEKEGLVMHPSKQSSSLEFLELNCGCNKNADTTMKWERNVFPIGVEPLQKHQSLDLSSILFGVRPNSKPVNAAGRCFNLKGPIMRTKSTPFELMQQRDTKELDVEENFYLESHPHNSCLEXARKVMHVSSAELNYSPSYDSKHQMCNASNAKQHDSGAFKVLSYMSLVEDPYFSSLSPSSAGSKMSLDLPEKQDETVLPCSSLPKSSTTLFPYYNSCDSLALNPPTNFPPPLNQETAVVATSPRINDEIPPPLPERTPESFIVVEEAGEFPLDVPKSLSSAVKVKIRTSLECSRTSESKKFDDLSVKPQSPKSDRHQDRSSSLPPPLPERTLESFLVADEDCMQAHPIETYSTSCPNTMENSTSSKQTLKTPGKCFTRSKSLKILRNMKKSICNSSPSNKPADSVQSNNSSSFLNFGFANRFSKPKGPRNPPSTWNI*