Part of scaffold_1497 (Scaffold)

For more information consult the page for scaffold_1497 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

AP4B1 ENSTTRG00000012359 (Bottlenosed dolphin)

Gene Details

adaptor-related protein complex 4, beta 1 subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011743, Bottlenosed dolphin)

Protein Percentage 63.07%
cDNA percentage 64.52%
Ka/Ks Ratio 0.50071 (Ka = 0.0548, Ks = 0.1095)

AP4B1 ENSBTAG00000003614 (Cow)

Gene Details

AP-4 complex subunit beta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004711, Cow)

Protein Percentage 92.69%
cDNA percentage 91.75%
Ka/Ks Ratio 0.19604 (Ka = 0.0439, Ks = 0.2237)

AP4B1  (Minke Whale)

Gene Details

adaptor-related protein complex 4, beta 1 subunit

External Links

Gene match (Identifier: BACU002689, Minke Whale)

Protein Percentage 96.91%
cDNA percentage 97.14%
Ka/Ks Ratio 0.43799 (Ka = 0.0225, Ks = 0.0513)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2136 bp    Location:423234..413716   Strand:-
>bmy_17296
ATGCCGTACCTGGGCTCCGAGGACGTGGTGAAGGAGCTGAAGAAGGCTCTGTGTAACCCTCACATTCAGGCTGATAGGCTGCGCTATCGGAATGTCATCCAGCGAGTGATTAGGCACATGACCCAGGGCTCGGACATGTCTGGTGTTTTCATGGAAATGGTGAAGGCCAGTGCCACTATAGATATTGTTCAGAAGAAGTTGGTTTATCTCTACATGTGTACCTATGCCCCCCTGAAACCAGATCTGGCTCTCCTGGCCATTAATACACTGTGCAAAGACTGTTCGGACCCCAACCCAATGGTGCGAGGGTTGGCACTACGGAGCATGTGTAGCCTCAGGTTGCCTGGTGTGCAGGAATATATCCAACAGCCAGTTCTCAACGGTCTGCAGGATAAGGCATCATATGTCAGGAGGGTAGCAGTCCTTGGCTGTGCCAAGATGCATACTCTTCATGGAGACTCTGAAGTGGATGGTGCCCTGGTAAACGAATTATATAGTTTGCTGCGTGACCAGGATCCAATTGTGGTTGTGAACTGCCTGAGGTCTCTGGAGGAAATTCTGAAACAGGAAGGAGGTGTTGTCATCAATAAGCCCATCGCCCACCATCTCTTAAATCGAATGTCAACACTGGACCAGTGGGGCCAGGCTGAAGTACTGAACTTTCTGCTCCGCTACCAGCCCCGCAGTGAGGAGGAGCTGTTTGACATTCTCAACCTGTTGGACGGTTTTCTCAAGAGCAGTAGCCCAGGTGTGGTGATGGGAGCCACCAAACTCTTTCTGATCTTGGCAAAAAACTTCCCCCATGTGCAAACCGACGTGCTCATGCAAGTCAAGGGAACTTTGCTGGCTGCCTGTTCTTCAGAGAGCCGCGAGCTCTGTTTTGCTGCCCTCTGCCATGTGCGCCAGGTCCTGCACAGTTTGCCGGGTCACTTTAGCAGCCACTACAAAAAGTTTTTTTGCTCCTACTCGGAGCCCCACTACATCAAGCTCCAGAAGGTGGAGGTGCTGTGTGAGCTGGTGAACGACGAGAACGTGCAGCAGGTGCTGGAGGAGCTTCGAGGGTACTGCACTGATGTGTCCGCCGACTTCGCGCAGGCTGCCATCTTTGCCATAGGTGGCATCGCCAGGACCTACACGGATCAATGTGTGCAGATTCTAACAGAGCTGCTGGGGCTTCAACAAGAGCACATTACCACAGTGGTGGTGCAGACTTTCCGAGACCTGGTTTGGTTGTGTCCTCAGTGTACAGAAGCTGTGTGTCAGGCCCTGCCCGGCTGTGAGGAGAGCATTCAAGATAGCGAGGGGAAGCAGGCGCTCATTTGGCTACTCGGTGTCCACGGGGAGAGAATCCCCAACGCTCCTTATGTGTTGGAAGACTTCGTAGAGAATCTGTCAAGATGGAGCTGCTCACGGCTCTGCTGCGCCTTTTCCTCTCTCGCCCCGCCGATACGGGACCGAGGTCTCTTCTACTATCGCCTCCTCTTAGCTGGCATCGATGAAGTGAAGCAGATCCTATGTAGCCCTAAATCTGACCCTTCTCTCAGACTTTTGGAGGATCAGGCAGAAAGACCCGTGAACAGCTGGGCCTCGGACTTCAACACGCTGGTGCCAGTATATGGCAAAGCCCGCTGGGCAACCATCTCTAAATGCCAAGGAGTAGAACGTCGTGGCCCAGAGCTTCCTAACACTGCATCTTTTGCCACATCAGGACCCCTGATTCCTGAAGAGAACAAGGAGAGGGTCCAAGAACTCCCTGATTCCAGAGCCCTCATGCTAGTCCCCAATCACCAGCTTACTGCTGAGTGTTTTGAGAAAACTTGGCTGAGCCTCAAAGTTGCTCATCAGCAGGTGTTCCCGTGGCAGGGAGCAGTCCATCCTGACACCCTCCAGATGGCCCTGCAAGTCGTGAACATCCAGACCATCGCGATGAACAGGGCTGGGGCTCAGCCGTGGAAAGCCTACCTCAGCGCTCAGGATGACACTGGCTGTCTGTTCCTGACAGAACTGCTGTTGGAGCCCGAGAACTTGCAAATGCAGATCTCAGTAAAACAAAACAAGGCGAGGACAGAGACACTGAACAGTTTTATTTCTGTATTAGAAACTGTGATTGGAACAATTGGAGACATAAAATCATAA

Related Sequences

bmy_17296T0 Protein

Length: 712 aa      View alignments
>bmy_17296T0
MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRHMTQGSDMSGVFMEMVKASATIDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCSDPNPMVRGLALRSMCSLRLPGVQEYIQQPVLNGLQDKASYVRRVAVLGCAKMHTLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQEGGVVINKPIAHHLLNRMSTLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDGFLKSSSPGVVMGATKLFLILAKNFPHVQTDVLMQVKGTLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTYTDQCVQILTELLGLQQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEESIQDSEGKQALIWLLGVHGERIPNAPYVLEDFVENLSRWSCSRLCCAFSSLAPPIRDRGLFYYRLLLAGIDEVKQILCSPKSDPSLRLLEDQAERPVNSWASDFNTLVPVYGKARWATISKCQGVERRGPELPNTASFATSGPLIPEENKERVQELPDSRALMLVPNHQLTAECFEKTWLSLKVAHQQVFPWQGAVHPDTLQMALQVVNIQTIAMNRAGAQPWKAYLSAQDDTGCLFLTELLLEPENLQMQISVKQNKARTETLNSFISVLETVIGTIGDIKS*