Part of scaffold_1497 (Scaffold)

For more information consult the page for scaffold_1497 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCLRE1B ENSTTRG00000012398 (Bottlenosed dolphin)

Gene Details

DNA cross-link repair 1B

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011760, Bottlenosed dolphin)

Protein Percentage 85.47%
cDNA percentage 89.6%
Ka/Ks Ratio 0.78546 (Ka = 0.1066, Ks = 0.1357)

DCLRE1B ENSBTAG00000003616 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000004713, Cow)

Protein Percentage 87.68%
cDNA percentage 91.25%
Ka/Ks Ratio 0.40107 (Ka = 0.0683, Ks = 0.1703)

DCLRE1B  (Minke Whale)

Gene Details

DNA cross-link repair 1B

External Links

Gene match (Identifier: BACU019939, Minke Whale)

Protein Percentage 88.39%
cDNA percentage 91.4%
Ka/Ks Ratio 0.84425 (Ka = 0.0888, Ks = 0.1052)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1488 bp    Location:423762..428837   Strand:+
>bmy_17297
ATGAACGGGGTCTTGATCCCTCAAACGCCCATCGCTGTGGACTTTTGGAGCCTGCGCCGGGCTGGCTCCGCCCGGCTCTTCTTCTTGTCCCACATGCACTCGGACCACACCGTGGGTCTCTCTAGCACCTGGACCCGGCCCCTCTACTGCTCCCCAGTCACCGCTTACCTCTTGCACCGTCACCGACAGGTATCTAAGCAGTGGATCCGAGCCCTGGAGGTTGGTGATTTTCGGTATACACCGTCCATGCTGAAGGAGCCAGCCCTGAGACTGGGGAAACAGATCCATACTTTATACCTAGACAACACCAATTGCAACCCAGCCCTGGTTCTTCCTTCCAAAGAAGAAGCTGCCCGCCAGATTGTTGAGCTCATTCGAAAGCACCCACAACATAACATAAAGATTGGACTCTATAGCCTGGGAAAAGAGTCACTGCTGGAGCAGCTGGCCCTGGAGTTTCAGACCTGGGTGGTATTGAGTCCTCGGCGCCTGGAGTTGGTGCAGCTGCTGGGCCTGGCAGATGTGTTCACAGTGGAGGAGAAGGCTGGCCGCATCCATGCCGTGGACCACATGGAGATCTGCCATTCCGCTATGCTGCGTTGGAACCAGACCCACCCTACCATTGCTATCCTCCCCACCAGCCGGAAAATCTACCGTTCCCACCCTGATATCCACATCATCCCTTACTCTGACCATTCCTCCTACCCTGAGCTCCGTGCCTTTGTCGAAGCACTGAGGCCTTGCCAGGTGGTGCCCATTGTCAGGCGACAACCCTGTAGGGACTACTTTCAGGACAGCCTGAGCCCCAGGCTCTCTGTGCCTCTGATTCCAGACTCTGTACAGCAATACATGAGTTCCTCCTCTAGAAATCCAAGTTTTCTCTGGCTGTTGTTAGAAAGGAAGCTAAAGAGACTGAGAACCCAGGGTGTCGTGTTTGAATCCCTTGAGGAAAATGCTGATCACTCTCAAGCTGACAGGGACTCGAAGAAGACCAAGAATGAGAACCTTTCTGGGGAGCTTGAGAAGCAGCCCTCCCACCATCCTTTGAAGATCAAGCAGCAGTCGTTCCCGGACATCTGCAACAAAGAATGGGAGGGGGCAGTCCCTTCCTCCGAGTCCCAGAAGATGGTGACTGTATTGACTGCCCCCTCGGGTTTTTCAGTGCACTTAAGGTCTACAGAAAAAGAATTTCCCTCTCCGGAAACTGGGGAGGAAATCGGTGTAGGGCCCTACTTGGTACCCAGGGGAGACAATGCGGGCTCAGCAGCCACAGGGAACCAGAGAGCCTGGATGAGCCAGGATTCTCCCCAGTCTCACAGCAGCAAGGCTGCTCCTCTTCTGGCTCCTGAGTACAGGGGCCTGGCACTCAAATACCTTCTGACTCCAGTGAACTTTCTCCAGGCAGGGTTCTCTTCCAGGGGCTTTGACCAGCAAGCAGAAAAATACCATCAACTCTTGCTCAAGTACAGACAGGAGAGTATAGAATGA

Related Sequences

bmy_17297T0 Protein

Length: 496 aa      View alignments
>bmy_17297T0
MNGVLIPQTPIAVDFWSLRRAGSARLFFLSHMHSDHTVGLSSTWTRPLYCSPVTAYLLHRHRQVSKQWIRALEVGDFRYTPSMLKEPALRLGKQIHTLYLDNTNCNPALVLPSKEEAARQIVELIRKHPQHNIKIGLYSLGKESLLEQLALEFQTWVVLSPRRLELVQLLGLADVFTVEEKAGRIHAVDHMEICHSAMLRWNQTHPTIAILPTSRKIYRSHPDIHIIPYSDHSSYPELRAFVEALRPCQVVPIVRRQPCRDYFQDSLSPRLSVPLIPDSVQQYMSSSSRNPSFLWLLLERKLKRLRTQGVVFESLEENADHSQADRDSKKTKNENLSGELEKQPSHHPLKIKQQSFPDICNKEWEGAVPSSESQKMVTVLTAPSGFSVHLRSTEKEFPSPETGEEIGVGPYLVPRGDNAGSAATGNQRAWMSQDSPQSHSSKAAPLLAPEYRGLALKYLLTPVNFLQAGFSSRGFDQQAEKYHQLLLKYRQESIE*