Part of scaffold_1505 (Scaffold)

For more information consult the page for scaffold_1505 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

FDFT1 ENSTTRG00000011965 (Bottlenosed dolphin)

Gene Details

farnesyl-diphosphate farnesyltransferase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011344, Bottlenosed dolphin)

Protein Percentage 98.23%
cDNA percentage 97.87%
Ka/Ks Ratio 0.24801 (Ka = 0.0136, Ks = 0.0548)

FDFT1 ENSBTAG00000012432 (Cow)

Gene Details

squalene synthase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016504, Cow)

Protein Percentage 96.1%
cDNA percentage 93.03%
Ka/Ks Ratio 0.07791 (Ka = 0.022, Ks = 0.2826)

FDFT1  (Minke Whale)

Gene Details

farnesyl-diphosphate farnesyltransferase 1

External Links

Gene match (Identifier: BACU015244, Minke Whale)

Protein Percentage 98.58%
cDNA percentage 98.7%
Ka/Ks Ratio 0.39864 (Ka = 0.0103, Ks = 0.0259)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 849 bp    Location:384007..420322   Strand:+
>bmy_17305
ATGGAGTTCGTGAAGTGCTTGGGGCACCCCGAGGAGTTCTACAACCTGCTGCGCTTCCAGATGGGGGGCCGGCAGAAGGTGATACCCAAGATGGACCAGGACTCACTCAGCAGCAGCTTGAAAACTTGTTACAAGTACTTGAATCAGACCAGTCGCAGTTTCGCAGCTGTTATCCAGGCGCTGGATGGGGAAATGCGCCATGCAGTATGCATATTTTATCTGGTTCTCCGAGCCCTGGACACTCTGGAAGATGACATGACCATCAGTATAGAAAGAAAGGTCCCCCTGTTACACAACTTCCACTCGTACCTTTATGAGCCCGACTGGCGGTTCACGGAGAGCAAGGAGAAGGACCGACAAGTCCTGGAGGACTTTCCAACGATCTCCCTGGAGTTTCGAAATCTGGCTGAGAAATACCAAACAGTGATTGTTGACATTTGCCGGAAGATGGGATTTGGGATGGCCGAGTTTTTGGATAAGCGTGTGGCGTCTGAACGGGAGTGGGACAAGGCTTGGAGCAAGTATGTGAACAAGCTGGGTGACTTTGCGAAGCCAGAGAACATGGACTTGGCCGTGCAGTGCCTGAATGAGCTCATAGCCAGCACGCTGCACCACATCCCTGACGTCATCACTTACCTTTCACGACTTAGAAACCAGAGCATATTCAACTTCTGTGCTATTCCACAGGTCATGGCCATTGCCACTTTGGCTGCCTGTTATAATAATCAGCAGGTATTCAAAGGGGTGGTGAAGATACGAAAAGGGCAAGCAGTCACCCTGATGATGGATGCCACCAACATGCCAGCTGTAAAAGCTATAATACACCAGTACATGGAAGAGTGGACTTGA

Related Sequences

bmy_17305T0 Protein

Length: 283 aa      View alignments
>bmy_17305T0
MEFVKCLGHPEEFYNLLRFQMGGRQKVIPKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRHAVCIFYLVLRALDTLEDDMTISIERKVPLLHNFHSYLYEPDWRFTESKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGFGMAEFLDKRVASEREWDKAWSKYVNKLGDFAKPENMDLAVQCLNELIASTLHHIPDVITYLSRLRNQSIFNFCAIPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYMEEWT*