Sequence details bmy_17311 (Coding sequence)

Part of scaffold_1493 (Scaffold)

For more information consult the page for scaffold_1493 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LHX8 ENSTTRG00000015391 (Bottlenosed dolphin)

Gene Details

LIM homeobox 8

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014585, Bottlenosed dolphin)

Protein Percentage 71.59%
cDNA percentage 74.4%
Ka/Ks Ratio 0.60152 (Ka = 0.1441, Ks = 0.2395)

LHX8 ENSBTAG00000019192 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000025544, Cow)

Protein Percentage 84.62%
cDNA percentage 84.52%
Ka/Ks Ratio 0.4222 (Ka = 0.1354, Ks = 0.3206)

LHX8  (Minke Whale)

Gene Details

LIM homeobox 8

External Links

Gene match (Identifier: BACU009961, Minke Whale)

Protein Percentage 86.85%
cDNA percentage 88.99%
Ka/Ks Ratio 0.86005 (Ka = 0.1161, Ks = 0.135)

Additional orthologs identified in other species via the OPTIC pipeline.

LHX8 (Human)   (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1164 bp    Location:381761..416326   Strand:+
Raw sequence 
>bmy_17311
ATGTCGGAGGAGTGCGGGCGGACTGCAGCCCTGGCGGCCGGGAGGACTCGGAAAGGCGCCGGGGAAGAGGGACTGGTGAGCCCCGAGGGAGTGGCGGACGAGGACTCGTGCTCCTCCTCGGCCCCACTGTCCCCGTCGTCCTCGCCCCGGTCCATGGCCTCGGGCTCCGTCTGCCCCCCTGGCAAGTGTGTGTGCAACAGCTGCGGCCTGGAGATCGTGGACAAGTACCTTCTCAAGTTCTCGCTGGAGAATGTAGACTTTCTCAGCACTACGGCCCAGTCAGGGGCAACTCATGCGGTGGGAAAGAGTGGGAGAAGAAATCTTAGAATACCCGCTGTTACAAAACTGCTTACGCTAAAGATGTGCCGCTTATACAATGATAGCAACAGTTTAAGAAGGTATGGAACTCGCTGCTCTCGCTGTGGGAGGCACATCCATTCTACTGACTGGGTCCGGAGGGCCAAGGGGAATGTCTATCACTTGGCGTGCTTTGCCTGCTTTTCTTGCAAAAGGCAACTTTCCACAGGAGAGGAGTTTGCTTTGGTGGAAGAGAAAGTCCTTTGCAGAGTGCATTATGACTGCATGCTGGATAATTTAAAAAGAGAAGTGGAAAATGGTAATGGGATTAGTGTCGAAGGCGCCCTCCTCACAGAGCAAGATGTCAATCATCCAAAACCAGCAAAAAGAGCTCGAACAAGCTTTACAGCAGATCAGCTCCAGGTTATGCAAGCACAATTTGCTCAGGACAACAACCCAGATGCACAGACCCTCCAGAAACTGGCAGAAAGGACAGGCTTGAGCAGACGTGTGATACAGGTGTGGTTTCAGAACTGTAGAGCACGCCACAAGAAACACGTCAGTCCTAATCACTCCTCCTCTGCCCCAGTCACAGCAGTCCCGCCCTCCAGGCTGTCTCCACCCATGTTAGAAGAAATGGCTTATTCTGCCTATGTGCCCCAAGATGGGACAATGTTAACTGCGCTGCATAGTTATATGGATGCATTTCCAACATCACTTTGCTGCCCAGTCCAGGGAATTGGAAAGAATGATAAGCAGGGTGACAAAGACCATCTTAGGGACACAGAATGGCTAAGAGAGAAGGAGCATGATGAATCTGAGGCTTTGCTGATGGACCGAATTGAGAGGCTTCAGCTCTTACATTGA

Related Sequences

bmy_17311T0 Protein

Length: 388 aa      View alignments
>bmy_17311T0
MSEECGRTAALAAGRTRKGAGEEGLVSPEGVADEDSCSSSAPLSPSSSPRSMASGSVCPPGKCVCNSCGLEIVDKYLLKFSLENVDFLSTTAQSGATHAVGKSGRRNLRIPAVTKLLTLKMCRLYNDSNSLRRYGTRCSRCGRHIHSTDWVRRAKGNVYHLACFACFSCKRQLSTGEEFALVEEKVLCRVHYDCMLDNLKREVENGNGISVEGALLTEQDVNHPKPAKRARTSFTADQLQVMQAQFAQDNNPDAQTLQKLAERTGLSRRVIQVWFQNCRARHKKHVSPNHSSSAPVTAVPPSRLSPPMLEEMAYSAYVPQDGTMLTALHSYMDAFPTSLCCPVQGIGKNDKQGDKDHLRDTEWLREKEHDESEALLMDRIERLQLLH*