Sequence detailsbmy_17334 (Coding sequence)

Part of scaffold_1515 (SequenceType object (1))

For more information consult the page for scaffold_1515 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TTC13ENSTTRG00000003972 (Bottlenosed dolphin)

Gene Details

tetratricopeptide repeat domain 13

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000003741, Bottlenosed dolphin)

Protein Percentage 99.77%
cDNA percentage 98.33%
Ka/Ks Ratio 0.02148 (Ka = 0.0011, Ks = 0.0527)

TTC13ENSBTAG00000010367 (Cow)

Gene Details

tetratricopeptide repeat protein 13 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000013692, Cow)

Protein Percentage 98.4%
cDNA percentage 95.43%
Ka/Ks Ratio 0.04762 (Ka = 0.0076, Ks = 0.1602)

TTC13 (Minke Whale)

Gene Details

tetratricopeptide repeat domain 13

External Links

Gene match (Identifier: BACU005023, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.47%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.015)

Additional orthologs identified in other species via the OPTIC pipeline.

TTC13 (Human)   Ttc13 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1314 bp    Location:347259..289062   Strand:-
Raw sequence 
>bmy_17334
ATGATGCTTTACCACCACGGCAGCTTGCAGGAAGCCCTTAAGAACTTCAAGCGGTGTCTGCAGCTGGAACCATATAACGAGGTGTGCCAGTACATGAAAGGACTCAGCCACGTAGCAATGGGACAGTTTTATGAAGGGATAAAAGCACAAACTAAAGTTATGCTAAATGACCCTCTCCCAGGCCAGAAGGCCAGCCCAGAGTACCTTAAAGTGAAGTATCTCCGAGAGTATTCTCGATATCTTCATGCACACCTTGATACTCCCCTTACGGAATATAACATTGACGCGGACCTGCCCGGAAGCTTTAAAGACCACTGGGCTAAGAATCTGCCTTTCCTCATAGAAGACTACGAAGAGCAGCCAGGGCTGCAACCCCACATAAAAGATGTGTTACATCAGAATTTTGAGAGTTATAAGCCCGAGGTCCAAGAGCTGATTTGTGTAGCTGATCGTTTGGGATCTCTGATGCAATATGAAACACCTGGTTTCCTGCCAAACAAGAGAATACACAGAGCCATGGGTTTGGCAGCCTTAGAAGTCATGCAAGCTGTACAGCGTACGTGGACCAGTTCAAAGGTTCGAATGAATGGGAAAACGCGGCTGATGCAGTGGAGAGACATGTTTGACATCGCAGTGAAGTGGAGACGGATTGCTGACCCAGACCAGCCAGTGTTATGGTTGGATCAAATGCCAGCACGAAGTCTTAGCAGAGGTTTTAACAACCACGTCAATTTAATCAGGGGTCAGGTGATCAACATGAGATACCTGGAATATTTTGAGAAAATTCTTCATTTTATTAAAGATAGAATTCTAGTTTATCATGGAGCTAATAATCCTAAAGGATTGTTGGAAGTTAGAGAAGCTCTGGAAAAGGTCCACAAAGTGGAAGACCTCCTTCCAATTATGAAGCAGTTTAATACTAAAACGAAGGATGGGTTCACTGTGAACACAAAAGTTCCCAGCCTCAAAGACCAAGGGAAGGAATATGATGGCTTCACGATCACTATTACAGGAGACAAGGTAGGCAATATACTATTTTCCGTGGAAACTCAGACCACAGAAGAAAGAACACAGTTATATCACGCCGAAATAGATGCACTTTATAAAGATCTAACAGCAAAAGGAAAAGTACTGATTCTCTCATCAGAATTTGGGGAGACTGATGCTGTTGGCAACTTAATCTTATCCTTAGTTTATTACTTTTATAACTTAATGCCGCTCTCTCGCGGATCCAGTGTGATCGCTTACTCAGTGATCGTGGGAGCCCTGATGGCGAGTGGAAAAGAAGTAGCAGGAAAAATTCCCAAAGGGAAG

Related Sequences

bmy_17334T0 SequenceType object (3)

Length: 438 aa      View alignments
>bmy_17334T0
MMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDADLPGSFKDHWAKNLPFLIEDYEEQPGLQPHIKDVLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTSSKVRMNGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHVNLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDGFTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGETDAVGNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKIPKGK