Part of scaffold_1566 (Scaffold)

For more information consult the page for scaffold_1566 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHODL ENSTTRG00000006706 (Bottlenosed dolphin)

Gene Details

chondrolectin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006344, Bottlenosed dolphin)

Protein Percentage 91.51%
cDNA percentage 93.73%
Ka/Ks Ratio 0.3995 (Ka = 0.05, Ks = 0.1251)

CHODL ENSBTAG00000000588 (Cow)

Gene Details

chondrolectin precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000782, Cow)

Protein Percentage 90.48%
cDNA percentage 89.38%
Ka/Ks Ratio 0.15755 (Ka = 0.0558, Ks = 0.3541)

CHODL  (Minke Whale)

Gene Details

chondrolectin

External Links

Gene match (Identifier: BACU000094, Minke Whale)

Protein Percentage 93.23%
cDNA percentage 94.27%
Ka/Ks Ratio 0.36816 (Ka = 0.0454, Ks = 0.1234)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 963 bp    Location:284148..264537   Strand:-
>bmy_17339
ATGAGCCGCGTGGTCTCGCTGCTGCTGGGCGCCGCACTGCTCTGCGGCCACGGCGCCTTCTGCCGCCGGGTGGTCAGCGGCCAAAAGGTATGTTTTGCTGATTTCAAACATCCCTGCTACAAGATGGCCTACTTCCATGAGCTATCCAGCCGAGTGAGCTTTCAGGAGGCACGCCTGGCTTGTGAGAGCGAAGGGGGAGTCCTTCTCAGCCTTGAGAATGAAGCAGAACAGAAGTTAATAGAAAGCATGTTGCAAAACCTGACAAAGCCAGGAACCGGGATTTCTGATGGTGATTTCTGGATAGGGCTTTGGAGAAATGGAGAGGGGCAAACATCTGGTGCCTGCCCAGATCTCTACCAGTGGTCCGATGGAAGCAGTTCCCAGTACCGAAACTGGTATACTGATGAACCTTCCTGTGGAAGTGAAAAGTGTGTTGTGATGTATCATCAGCCAACAGCCAATCCTGGCCTTGGGGGTCCCTACCTTTACCAGTGGAATGACGACAGGTGCAACATGAAGCACAATTACATCTGCAAGTATGAACCAGAGATTAATCCAACAGCTCCGGTAGAAAAGACTTATTTTACAAATCAACCTGGAGACACTCATGAAAACGTGGTTGTTACTGAGGCAGGACTAATTCCCAATCTAATCTATGTTGTTATACCAACGATCCCATTGCTCTTACTGATACTGGTTGCTTTCGGAACCTGCTGTTTCCAGATGCTGCATAAAAGGAAAGCAAGGAGAAACTTCATCAAAGACTCAACTCCATTGTCATCTGAATGCCTTGCAGAAAGTTTAAATTCCAATCTGGTACACATGATGGCTTCTATCATTCCATTAAAGGAAGAACAAAAACTAGCCCACACCAGTCCACACTGTGGATTTCAAAAAGCACCAGGAAAGAAAGTGGCATGGAAGTATAATAATTCATTGACTTGGCTCCAGAAAAGAAAATAG

Related Sequences

bmy_17339T0 Protein

Length: 321 aa      View alignments
>bmy_17339T0
MSRVVSLLLGAALLCGHGAFCRRVVSGQKVCFADFKHPCYKMAYFHELSSRVSFQEARLACESEGGVLLSLENEAEQKLIESMLQNLTKPGTGISDGDFWIGLWRNGEGQTSGACPDLYQWSDGSSSQYRNWYTDEPSCGSEKCVVMYHQPTANPGLGGPYLYQWNDDRCNMKHNYICKYEPEINPTAPVEKTYFTNQPGDTHENVVVTEAGLIPNLIYVVIPTIPLLLLILVAFGTCCFQMLHKRKARRNFIKDSTPLSSECLAESLNSNLVHMMASIIPLKEEQKLAHTSPHCGFQKAPGKKVAWKYNNSLTWLQKRK*