Part of scaffold_1471 (Scaffold)

For more information consult the page for scaffold_1471 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GABRP ENSTTRG00000010915 (Bottlenosed dolphin)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, pi

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010352, Bottlenosed dolphin)

Protein Percentage 95.6%
cDNA percentage 96.82%
Ka/Ks Ratio 0.39567 (Ka = 0.0243, Ks = 0.0615)

GABRP ENSBTAG00000002779 (Cow)

Gene Details

Gamma-aminobutyric acid receptor subunit pi

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003604, Cow)

Protein Percentage 97.16%
cDNA percentage 95.26%
Ka/Ks Ratio 0.09387 (Ka = 0.0139, Ks = 0.1479)

GABRP  (Minke Whale)

Gene Details

gamma-aminobutyric acid (GABA) A receptor, pi

External Links

Gene match (Identifier: BACU019774, Minke Whale)

Protein Percentage 99.05%
cDNA percentage 99.13%
Ka/Ks Ratio 0.19549 (Ka = 0.0043, Ks = 0.0222)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1266 bp    Location:420709..399160   Strand:-
>bmy_17345
ATGTGCATCCAGGGGAATCAGTTTAACATCAAGGCCAGCAGAAGTGACAAGCTGTCCCTGCCTGGCTTTGAGAATCTCACAGCAGGATATAACAAGTTTCTCAGGCCCAATTTTGGTGGAGAACCTGTTCAGATAGCACTGACTCTGGACATTGCAAGTATTTCCAGTATTTCAGAGAGTAACATGGACTACACAGCCACCATATACCTCAGACAGCGCTGGACGGACCAGCGGTTGGTGTTCGAAGGCAACAAGAGCTTCACTCTGGATGCACGCCTAGTGGAGTTCCTCTGGGTGCCCGACACTTACATCGTGGAGTCCAAAAAGTCCTTCCTCCATGAAGTGACTGTGGGAAACAGGCTCGTCCGCCTCTTCTCCAATGGCACAGTCCTGTATGCTCTCAGAATCACAACAACCGTTGCATGTAACATGGACCTGTCTAAATACCCCATGGACACACAGACATGCAAGTTGCAACTAGAAAGCTGGGGATATGATGGGAATGACGTGGAGTTCAGCTGGCTGAGAGGGAATGACTCTGTGCGCGGGCTGGAGAACCTGCGGCTTGCTCAGTACACCATACAACAATATTTCACATTAGTTACCAGATCGCAGCAGGAAACAGGAAATTATACACGATTGGTCTTGCAATTTGAGCTTCAGAGGAATGTCCTGTATTTCATTTTGGAAACCTATGTTCCTTCCACTTTCCTGGTGGTGTTATCCTGGGTTTCGTTTTGGATCTCCCTTGATTCAGTTCCTGCAAGAACCTGCATTGGAGTGACCACTGTATTGTCAATGACCACACTGATGATTGGGTCCCGCACTTCTCTTCCGAACACCAACTGCTTCATAAAGGCCATTGACGTGTACCTGGGGATCTGCTTTAGCTTCGTGTTTGGGGCCCTCCTGGAATATGCAGTTGCCCACTACAGCTCCCTACAGCAGATGGCAGCCAAAGATAGGGGGAATGCGAAGGAAGTGGAAGAAGTCAACATCACTAACATCATCAACAGCTCCATCTCCAGCTTTAAACGGAAGATCAGCTTTGCCAGCATTGAAATTTCCAGCGATAATGTTGACTACAGTGACCTGACAATGAAAACTAGTGACAAGTTCAAGTTTATCTTCCGAGATAAGATGGGCAGGATTGTTGATTATTTCACAATTCAAAACCCCAGTAATGTTGATCGATATTCCAAACTACTATTTCCTTTGATTTTTATGCTAGCCAATGTATTTTACTGGGCATACTACATGTATTTT

Related Sequences

bmy_17345T0 Protein

Length: 422 aa      View alignments
>bmy_17345T0
MCIQGNQFNIKASRSDKLSLPGFENLTAGYNKFLRPNFGGEPVQIALTLDIASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLVRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTLVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGNAKEVEEVNITNIINSSISSFKRKISFASIEISSDNVDYSDLTMKTSDKFKFIFRDKMGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMYF