Part of scaffold_1511 (Scaffold)

For more information consult the page for scaffold_1511 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NEFM ENSTTRG00000006514 (Bottlenosed dolphin)

Gene Details

neurofilament, medium polypeptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006166, Bottlenosed dolphin)

Protein Percentage 93.66%
cDNA percentage 95.26%
Ka/Ks Ratio 0.38138 (Ka = 0.0253, Ks = 0.0664)

NEFM ENSBTAG00000039530 (Cow)

Gene Details

neurofilament, medium polypeptide

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000036438, Cow)

Protein Percentage 93.66%
cDNA percentage 93.37%
Ka/Ks Ratio 0.14585 (Ka = 0.0315, Ks = 0.2158)

NEFM  (Minke Whale)

Gene Details

neurofilament, medium polypeptide

External Links

Gene match (Identifier: BACU015302, Minke Whale)

Protein Percentage 81.84%
cDNA percentage 86.74%
Ka/Ks Ratio 0.77668 (Ka = 0.1483, Ks = 0.1909)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2523 bp    Location:59792..64346   Strand:+
>bmy_17347
ATGAGCTACACGCTGGACTCGCTGGGCAACCCGTCCGCCTACCGGCGGGTAACCGACACCCGCTCGAGCTTCAGCCGCGTCAGCGGCTCCCCGTCCAGCGGCTTCCGCTCGCAGTCATGGTCCCGCGGCTCGCCCAGCACCGTGTCCTCCTCCTACAAGCGCAGCGCGCTCGCCCCGCGCCTCGCCTACAGCTCGGCCATGCTCAGCTCCGCCGAGAGCAGCCTCGACTTCAGCCAGTCCTCGTCCCTGCTTAACGGCGGCTCTGGGCCGGGCGGCGACTACAAGCTGTCCCGCTCCAATGAGAAGGAGCAGCTGCAGGGGCTGAACGACCGCTTCGCGGGCTACATCGAGAAAGTGCACTACCTAGAACAGCAGAACAAGGAGATCGAGGTGGAGATCCAGGCGCTACGGCAGAAGCAGGCCTCGCACGCCCAGCTGGGCGACGCGTACGACCAGGAGATCCGCGAGCTGCGCGCCACGCTGGAGCTGGTGAACCACGAGAAGGCTCAGGTGCAGCTGGACTCGGACCACCTGGAAGAGGACATCCACAGGCTCAAGGAGCGCTTCGAGGAGGAGGCACGGCTGCGCGACGACACCGAGGCGGCCATCCGCGCGCTGCGCAAAGACATCGAAGAGTCGTCGCTGGTCAAGGTGGAGCTGGACAAAAAGGTGCAGTCGCTGCAGGATGAGGTGGCCTTCCTGCGGAGCAATCACGAGGAGGAGGTGGCCGACCTGCTGGGCCAGATCCAGGCGTCCCACGTCACCGTGGAGCGCAAAGACTACCTGAAGACAGACATCTCGTCGGCGCTGAAGGAGATCCGCTCCCAGCTCGAATGCCACTCGGACCAGAACATGCACCAGGCCGAAGAATGGTTTAAGTGCCGCTACGCCAAGCTCACCGAGGCAGCCGAGCAGAACAAGGAGGCCATCCGTTCCGCCAAGGAAGAGATCGCCGAGTACCGGCGCCAACTGCAGTCCAAGAGCATCGAGCTCGAGTCGGACACCATCCAGCAGTTGGAAAATGAGCTTCGGGGCACAAAGTGGGAAATGGCTCGTCATCTGAGAGAATACCAGGATCTCCTCAACGTCAAGATGGCTCTAGATATCGAGATCGCTGCATACAGGAAACTCCTGGAGGGTGAAGAGACCAGATTTAGCACATTTGCAGGAAGCATCACTGGGCCGCTGTATACACACCGACAGCCCTCCATCACAATATCCAGTAAGTTTCAGAAAACCAAGGTAGAGGCTCCCAAGCTAAAGGTCCAACACAAATTTGTCGAGGAGATCATAGAGGAGACCAAGGTGGAAGATGAGAAATCAGAAATGGAAGAAGCCCTGACGGCCATTGCAGAGGAATTGACAGTTTCCATGAAAGAAGAGGGCAAGGAAGAAGAGGCTGAAGAAAAGAAAGAGAAAAAAGAAGCCGAAGAAGAAGTTGTAGCTGCCAAAAAGTCTCCAGTGAAAGCTATTGCACCTGAACTTAAAGGAGAGGAGGAAGAGGGCAGAGAGGAAGAGGAGGAAGAGGAGGGTGCTAAATCAGACCAAGCTGAGGAAGGAGGCTCTGAGAAGGAAGTTTCTAGTGGAAAAGAGGAAGGTGAGCAGGAAGAGGAAGGAGAAACAGAGCCTGAGGGTGAAGGAGAGGAAGCCGCCGAAGCTAAGGAGGAAAAGAAAATGGAGGAAAAGGGTGAAGAAGTGGCTCCCAAGGAGGAGCTGGTGGCAGAAGCCAAGGTGGAGAAGCCAGAGCAAGCCAAGTCCCCGGTGCCAAAGTCACCCGTGGAAGAGGTGAAGCCCAAAGCAGAAGCTGGAGCCGAGAAAGGAGAACAGAAAGAGGAGGAAGGGAAAGTGGAGGAAGAAAAGAAGGAAGAAGCAAAGGAAGCTCCCAAGGAAGAGAAGGGAGAGAAAAAGGAGGAGAAGCCAAAGGATGTGCCAGAGAAGAAGAAGGCTGAATCCCCAGTGAAGGAGGAAGTCGTGGAGGAGGCGGTCGCCAAATCAGTAAAGGTGAGCTTGGAGAAGGATGCCAAAGAGGAGGAAAAGCCACAGCAGCAGGAGAAGGAGAAAGAGGAGAAGGAGAAAGAGAAGGAGAAGGAGAAAGAGAAGGAGAAGAAGAAAGCAGAAGAGGTGGGGAAGAAGGAGGAGGGAGGTTTGAAGGATTCCAGGAAGGAAGACATAGCCATCAATGGGGAGGTGGAAGGAAAAGAGGAGCACKTGCAGGAAGCTAAGGAGAAGGGCAGTGGGGGAGAAGAGAAGAAAGGGGTTGTCACCAACGGGCTAGACTTGAGCCCAGCAGATGAAAAGAAGGGTGGTGATAGAGGTGAGGAGAAAGTGGTGGTCACCAAAATGGTAGACAAAACCACCAGTGAGGGGGGAGATGGTGCTACCAAGTATATCACCAAATCTGTAACCGTCACTCAAAAGGTCGAAGAGCATGAAGAGACCTTTGAGGAGAAATTAGTGTCTACCAAAAAGGTTGAGAAGGTCACTTCACACGCCGTAGTAAAGGAAGTCACCCAGAGTGACTAA

Related Sequences

bmy_17347T0 Protein

Length: 841 aa      View alignments
>bmy_17347T0
MSYTLDSLGNPSAYRRVTDTRSSFSRVSGSPSSGFRSQSWSRGSPSTVSSSYKRSALAPRLAYSSAMLSSAESSLDFSQSSSLLNGGSGPGGDYKLSRSNEKEQLQGLNDRFAGYIEKVHYLEQQNKEIEVEIQALRQKQASHAQLGDAYDQEIRELRATLELVNHEKAQVQLDSDHLEEDIHRLKERFEEEARLRDDTEAAIRALRKDIEESSLVKVELDKKVQSLQDEVAFLRSNHEEEVADLLGQIQASHVTVERKDYLKTDISSALKEIRSQLECHSDQNMHQAEEWFKCRYAKLTEAAEQNKEAIRSAKEEIAEYRRQLQSKSIELESDTIQQLENELRGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSTFAGSITGPLYTHRQPSITISSKFQKTKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAIAEELTVSMKEEGKEEEAEEKKEKKEAEEEVVAAKKSPVKAIAPELKGEEEEGREEEEEEEGAKSDQAEEGGSEKEVSSGKEEGEQEEEGETEPEGEGEEAAEAKEEKKMEEKGEEVAPKEELVAEAKVEKPEQAKSPVPKSPVEEVKPKAEAGAEKGEQKEEEGKVEEEKKEEAKEAPKEEKGEKKEEKPKDVPEKKKAESPVKEEVVEEAVAKSVKVSLEKDAKEEEKPQQQEKEKEEKEKEKEKEKEKEKKKAEEVGKKEEGGLKDSRKEDIAINGEVEGKEEHXQEAKEKGSGGEEKKGVVTNGLDLSPADEKKGGDRGEEKVVVTKMVDKTTSEGGDGATKYITKSVTVTQKVEEHEETFEEKLVSTKKVEKVTSHAVVKEVTQSD*