Sequence detailsbmy_17360 (Coding sequence)

Part of scaffold_1499 (SequenceType object (1))

For more information consult the page for scaffold_1499 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPRBPENSTTRG00000001432 (Bottlenosed dolphin)

Gene Details

Vpr (HIV-1) binding protein

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001349, Bottlenosed dolphin)

Protein Percentage 93.45%
cDNA percentage 94.5%
Ka/Ks Ratio 0.64556 (Ka = 0.0513, Ks = 0.0794)

VPRBPENSBTAG00000006501 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000030640, Cow)

Protein Percentage 94.01%
cDNA percentage 91.17%
Ka/Ks Ratio 0.16834 (Ka = 0.0443, Ks = 0.2633)

Additional orthologs identified in other species via the OPTIC pipeline.

VPRBP (Human)   Vprbp (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3717 bp    Location:313758..335998   Strand:+
Raw sequence 
>bmy_17360
ATGGAAAATCAAGACATTGCTGCCAACTACAGGGATGAAAATTCACAGCTGGTGGCAATAGTACTTCGAAGACTGAGGGAGCTACAGCTTCAGGAAGTAGCTTTGAGGCAAGAAAGCAAGCGTCCTAGCCCACGAAAGCTCTCCTCTGAACCCCTTTTGCCTCTGGATGAAGAAGCTGTGGATATGGACTATGGCGACATGGCTGTAGATGTAGTGGATGGCGAACAAGAGGAAGCTTCTGGAGACATGGAGATCTCCTTTCATCTTGATTCAGGCCACAAGACCAGTAGCAGAGTGAACTCAGCAACTAAACCTGAGGAAGGAGGATTGAGGAAAAACAAGTCAGCAAAACAGGGTGACAGAGAGAGCTTTAGGAAAGCCAAGCAAAAGTTGGGTTTCTCATCATCTGATCCAGATCGCATGTTTGTTGAGCTGTCTAACAGCAGCTGGTCAGAAATGTCCCCCTGGGTGATTGGCACCAATTATACCCTTTATCCTATGACTCCTGCTATCGAGCAGCGACTTATTCTCCAGTATCTGACCCCTTTAGGAGAATATCAGGAGTTACTTCCCATATTCATGCAACTTGGATCACGGGATTTGATGATGTTCTATATTGACTTGAAACAGACTAACGATGTCCTACTTACATTTGAGGCACTCAAGCACCTAGCATCTCTCCTGCTCCATAACAAGTTTGCCACGGAATTTGTTGCGCATGGTGGAGTACAGAAATTACTGGAAATTCCTCGTCCTTCTATGGCTGCAACTGGTGTATCCATGTGCTTGTATTACCTGTCCTACAACCAGGATGCCATGGAAAGAGTTTGCATGCATCCCCACAACGTTCTGTCTGATGTGGTGAACTACACACTGTGGTTAATGGAATGTTCTCATGCTTCAGGATGCTGCCATGCTACCATGTTTTTCTCAATCTGCTTCTCCTTCCGGGCTGTATTGGAACTCTTTGACCGCTATGATGGTCTTCGTCGTCTGGTGAACTTGATCAGTACTTTGGAGATTCTAAATTTGGAAGATCAGGGTGCTCTTCTGAGTGATGATGAAATATTTGCTAGCCGCCAAACTGGGAAACATACCTGCATGGCCTTGCGCAAGTACTTTGAGGCTCACCTGGCCATTAAATTGGAACAAGTGAAGCAGTCACTTCAGAGGACTGAGGGTGGCATTCTTGTTCATCCTCAACCCCCGTACAAGAATATGGCCCAGCGCAGCTATATTGGGAGCCAGCTGAAGTCTTCCTCAAACTTTCTTGTGTCCAACTCTTGTTGCAGCTTATTTCTATTGCTTGTAATTGGAAGACCTATTATGCAAGTTGAAAACAGAGCAAAGCGGGACAAGGCTCAGGGAAAAACAGGTAATGGAATCAGGAGGAATGACACCGTGCGCTTTGCTTTGGATGTCTTGGCTATTCTCACTGTTGTGCCAAAAATTCAGCTCCAGTTGGCAGAATCAGTGGATGTGCTGGATGAGGCTGGCTCCACCGTCTCCACTGTAGGTATCAGCATTATTTTGGGAGTGGCTGAGGGTGAGTTCTTTATTCATGATGCTGAAATTCAGAAGTCAGCACTTCAGATTATCATCAATTGTGTGTGTGGCCCGGATAACAGAATTTCTAGTATTGGCAAATTTATCTCTGGAACTCCTCGGAGAAAGCTGCCTCAGACTCCCAAAAGCAGTGAGCACACTCTGGCTAAGATGTGGAATGTGGTCCAGTCCAACAATGGCATCAAGGTGCTTCTGTCCTTACTCTCCATCAAGATGCCCATCACAGATGCAGACCAGATCCGGGCCCTGGCCTGCAAGGCCCTGGTGGGCCTGTCTCGCAGTAGCACTGTCCGGCAGATCATCAGCAAACTGCCCCTTTTCAGCAGCTGTCAAATCCAGCAACTGATGAAAGAGCCTGTGCTGCAGGACAAGCGCAGTGACCATGTCAAGTTCTGCAAGTATGCTGCTGAGCTCATTGAACGGGTGTCAGGAAAGCCACTTCTCATTGGCACTGATGTGTCCCTGGCACGACTGCAGAAAGCAGATGTTGTTGCCCAGTCAAGGATCTCCTTTCCTGAGAAAGAGCTGCTTCTGCTGATACGAAACCATCTCATTTCTAAAGGGCTTGGGGAGACAGCAACTGTGCTGACTAAAGAGGCTGACCTGCCCATGACTGCTGCCTCCCATTCTTCTGCCTTCACCCCAGTCACTGCTGCTGCTTCTCCTGTTTCTCTTCCCCGTACCCCTCGCATCGCCAATGGCATTGCAACTCGACTGGGCAGCCATGCTGCTGTGGGTGCCTCTGCCCCTTCTGCCCCCACTGCTCATCCTCAGCCACGGGCCTCCCAGGGTTCACTAGCTCTGCCTGGCCCGTCTTATGCAGGCAACTCCCCTTTGATTGGTAGGATCAGTTTTATCAGAGAGAGGCCATCACCCTGCAATGGCAGGAAAATCAGAGTGTTGCGGCAGAAGTCGGACCATGGCGCCTACAGCCAAAGCCCAGCCATAAAGAAGCAGTTGGACAGACATCTTCCTTCCCCACCTACGCTGGACAGTATCATCACAGAATATCTTAGAGAGCAGCATGCTCGCTGCAAGAACCCAGTTGCCACCTGCCCACCTTTCTCTCTCTTTACTCCTCACCAATGTCCTGAGCCAAAACAGAGGCGGCAAGCGCCAATAAACTTTACCTCAAGGCTAAACCGCAGGGCATCATTTCCAAAGTATGGAGGGGTGGATGGCGGATGCTTTGATAGGCACCTTATCTTTAGCAGGTTCCGTCCTATTTCAGTGTTCCGGGAAGCCAATGAGGATGAGAGTGGCTTCACCTGTTGTGCATTCTCAGCACGAGAGCGGTTCCTGATGCTTGGCACCTGCACTGGGCAATTGAAGCTCTATAATGACGGGTCCTTGCTGCTGACATCTGCTACTTGGAGCCAGCCTCTGTCTGCACTTTGGGGAATGAAATCAGTGTTTGATATGAAGCATTCCTTCACAGAAGATCACTATGTTGAGTTCAGTAAGCACTCTCAGGATCGGGTCATAGGCACAAAAGGAGACATTGCCCATATTTATGATATTCAGACTGGCAACAAGCTGTTGACTCTGTTTAACCCAGATCTTGCCAACAACTACAAGAGGAACTGTGCCACCTTTAATCCTACAGATGATCTTGTCTTAAATGATGGCGTCCTCTGGGATGTCCGCTCTGCACAGGCCATCCACAAGTTTGACAAGTTCAACATGAACATCAGTGGCGTTTTCCATCCGAATGGGCTGGAGGTCATCATTAATACTGAGATTTGGGACCTTCGTACTTTCCATCTTTTACACACAGTTCCTGCTCTAGATCAGTGTCGCGTGGTGTTCAACCACACGGGGACAGTGATGTATGGAGCTATGTTGCAGGCAGATGATGAAGATGACTTAATGGAAGAGAGGATGAAAAGCCCTTTTGGATCATCCTTCCGAACATTTAATGCAACTGATTACAAACCTATTGCGACCATTGATGTGAAACGGAACATTTTTGACCTATGTACAGACACCAAAGACTGCTATCTTGCTGTCATCGAGAACCAAGGCAGCATGGATTCTCTGAACATGGACACGGTGTGCAGGCTGTATGAAGTAGGCAGGCAGCGTCTGGCAGAGGATGAGGATGAAGAGGAGGACCAGATTTTTGCTATAGGGGTGTTTGCTACCTGTTAG

Related Sequences

bmy_17360T0 SequenceType object (3)

Length: 1239 aa      View alignments
>bmy_17360T0
MENQDIAANYRDENSQLVAIVLRRLRELQLQEVALRQESKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEISFHLDSGHKTSSRVNSATKPEEGGLRKNKSAKQGDRESFRKAKQKLGFSSSDPDRMFVELSNSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRDLMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEGGILVHPQPPYKNMAQRSYIGSQLKSSSNFLVSNSCCSLFLLLVIGRPIMQVENRAKRDKAQGKTGNGIRRNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLPRTPRIANGIATRLGSHAAVGASAPSAPTAHPQPRASQGSLALPGPSYAGNSPLIGRISFIRERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDDLMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDSLNMDTVCRLYEVGRQRLAEDEDEEEDQIFAIGVFATC*