Part of scaffold_1499 (Scaffold)

For more information consult the page for scaffold_1499 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MANF ENSTTRG00000001430 (Bottlenosed dolphin)

Gene Details

mesencephalic astrocyte-derived neurotrophic factor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001347, Bottlenosed dolphin)

Protein Percentage 98.62%
cDNA percentage 98.85%
Ka/Ks Ratio 0.35116 (Ka = 0.0071, Ks = 0.0202)

MANF ENSBTAG00000031797 (Cow)

Gene Details

Mesencephalic astrocyte-derived neurotrophic factor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042500, Cow)

Protein Percentage 96.55%
cDNA percentage 95.98%
Ka/Ks Ratio 0.11151 (Ka = 0.0152, Ks = 0.1367)

MANF  (Minke Whale)

Gene Details

mesencephalic astrocyte-derived neurotrophic factor

External Links

Gene match (Identifier: BACU003163, Minke Whale)

Protein Percentage 99.43%
cDNA percentage 99.04%
Ka/Ks Ratio 0.11981 (Ka = 0.0029, Ks = 0.024)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 525 bp    Location:371523..367774   Strand:-
>bmy_17363
ATGTGGGCTACGCACGGGCTGGCGGTGGCGCTGGCTCTGAGCGTGCTGCCGGGCAGCCGGGCGCTGCGACCGGGTGACTGCGAAGTTTGTATTTCTTATCTGGGAAGATTTTACCAGGACCTCAAAGACAGAGGTGTCACATTCTCACCAGCCTCTATTGAAAAAGAACTTATAAAGTTCTGCCGTGAAGCAAGAGGCAAAGAGAATCGGTTGTGCTACTACATTGGGGCCACAGATGATGCAGCCACCAAGATCATCAACGAGGTGTCGAAGCCCCTGGCCCACCACATCCCTGTGGAGAAGATCTGTGAGAAGCTCAAGAAGAAGGACAGCCAGATCTACAAGCAGATCGACCTGAGCACAGTGGACCTGAAGAAGCTTCGAGTTAAAGAGCTAAAGAAGATCCTGGACGACTGGGGAGAGACGTGCAAAGGCTGTGCAGAAAAGTCTGACTACATCCGGAAGATTAATGAACTGATGCCTAAATACGCCCCCAAGGCAGCCAGTTCACGGACTGATTTGTAG

Related Sequences

bmy_17363T0 Protein

Length: 175 aa      View alignments
>bmy_17363T0
MWATHGLAVALALSVLPGSRALRPGDCEVCISYLGRFYQDLKDRGVTFSPASIEKELIKFCREARGKENRLCYYIGATDDAATKIINEVSKPLAHHIPVEKICEKLKKKDSQIYKQIDLSTVDLKKLRVKELKKILDDWGETCKGCAEKSDYIRKINELMPKYAPKAASSRTDL*