Part of scaffold_1504 (Scaffold)

For more information consult the page for scaffold_1504 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BRF1 ENSTTRG00000006591 (Bottlenosed dolphin)

Gene Details

BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006240, Bottlenosed dolphin)

Protein Percentage 96.91%
cDNA percentage 95.75%
Ka/Ks Ratio 0.05468 (Ka = 0.0087, Ks = 0.1589)

BRF1 ENSBTAG00000012753 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041784, Cow)

Protein Percentage 84.9%
cDNA percentage 84.97%
Ka/Ks Ratio 0.08536 (Ka = 0.0783, Ks = 0.9175)

BRF1  (Minke Whale)

Gene Details

BRF1, RNA polymerase III transcription initiation factor 90 kDa subunit

External Links

Gene match (Identifier: BACU006336, Minke Whale)

Protein Percentage 92.08%
cDNA percentage 93.97%
Ka/Ks Ratio 0.42413 (Ka = 0.0527, Ks = 0.1243)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1473 bp    Location:201597..171800   Strand:-
>bmy_17373
ATGCTCCTTGACCTCAGCGACCTGCTCCAGGTGAACGTTTACGTGCTGGGGAAGACGTTCCTCCTTTTGGCGAGAGAGCTCTGCATCAACGCACCAGCAATAGACCCCTGCCTGTACATCCCGCGCTTCGCCCACCTGCTGGAGTTCGGTGACAAGAACCACGAGGTGTCCATGACGGCCCTGAGGCTCCTGCAGAGGATGAAGAGGGACTGGATGCACACGGGCCGGCGCCCTTCGGGCCTCTGTGGGGCAGCACTTCTGGTTGCAGCCAGGATGCACGATTTCCGGAGAACCGTCAAAGAGGTCATCAGCGTGGTCAAGGTGTGCGAATCCACGCTGCGCAAGAGTCAGCTGACCGTGGACGAGTTCATGAAGGTCGACCTGGAGGAGGAGTGTGACCCCCCGTCCTACACAGCTGGGCAGAGGAAGCTGCGGATGAAGCAGCTGGAACAAGTCCTGTCAAAACAGCTGGAGGAAGTGGAAGGCTCCGTTGAGGACACCACGTCCAGCTTATTTGGTGAGGAGGACGCCGAGGATGAAGAGCTGGAGGCCGCGGCCAGCCACCTGAACAAGGACTTCTACCAGGAGCTCCTTGGGGGAGGCATTCCTGGCAGCTCGGAGGCGGCAGGAGGCCCTGAGGGAGGCGGCAGGCCCCCCGCCCTGGAGTCCCTGCTCGGCCCTCTGCCCACCGCGGCCAGTCTGGGCATCTCGGACTCCATCCGAGAGTGCATCTCCTCGCAGAGCCGGGACCCCAAAGATGCTTCCGGGGACGGTGAGCTAGACCTCAGCGGCATCGATGACCTCGAGATCGACAGATACATCCTGAACGAGGCCGAAGCCCGTGTGAAGGCCGAGCTGTGGATGCGGGAGAATGCCGAGTACCTGCGGGAGCAGAGGGAGAAAGAAGCGAGAATCGCGAAGGAGAGGGAGCTCGGCATCTACAAGGAGCACAAGCCCAAGAAGTCTTGCAAGCGACGGGAGCCGATCCAGGCTAGCACGGCCGGGGAGGCCATCGAGAAGATGCTGGAGCAGAAGAAGATCTCCAGCAAGATCAACTACAGCGTGCTCCGGGACCTCGACAGCAAGGGCGGGGGCGGCCCACACAAGGAGGACGCCCGGCCTCAGGAGAGGGCTGGAGCCAGGAAGCTGTCTCGGCGGAAAACGCCAGCCAGCAGGAGCGGGGCTGATCCCGTGGCCAGCGTGGGGAAAAGGTTGAGGCCGATGGTGTCGACGCAGCCAGCTAAGAAGGTGGCCGTGGGAGAGGCCTTGCTCCCGAGCCCCCCCTCCCTGGGAGCCGAGCCCGTCAGGCCCACGGCGGTCGTGGTGGAGAGTGGGCCTGTGTCGTACCACCCAGAGGAGGACGTGGACGAGGAGGAGCCCGATGAGGAGGACGGGGAGCCCTGTGTCAGCGCCCTGCAGATGATGGGCGGCGACGATTACGGCTGTGACGGTGACGATGACGATGGCTACTGA

Related Sequences

bmy_17373T0 Protein

Length: 491 aa      View alignments
>bmy_17373T0
MLLDLSDLLQVNVYVLGKTFLLLARELCINAPAIDPCLYIPRFAHLLEFGDKNHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDFRRTVKEVISVVKVCESTLRKSQLTVDEFMKVDLEEECDPPSYTAGQRKLRMKQLEQVLSKQLEEVEGSVEDTTSSLFGEEDAEDEELEAAASHLNKDFYQELLGGGIPGSSEAAGGPEGGGRPPALESLLGPLPTAASLGISDSIRECISSQSRDPKDASGDGELDLSGIDDLEIDRYILNEAEARVKAELWMRENAEYLREQREKEARIAKERELGIYKEHKPKKSCKRREPIQASTAGEAIEKMLEQKKISSKINYSVLRDLDSKGGGGPHKEDARPQERAGARKLSRRKTPASRSGADPVASVGKRLRPMVSTQPAKKVAVGEALLPSPPSLGAEPVRPTAVVVESGPVSYHPEEDVDEEEPDEEDGEPCVSALQMMGGDDYGCDGDDDDGY*