Part of scaffold_1522 (Scaffold)

For more information consult the page for scaffold_1522 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PALMD ENSTTRG00000000968 (Bottlenosed dolphin)

Gene Details

palmdelphin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000911, Bottlenosed dolphin)

Protein Percentage 90.66%
cDNA percentage 91.42%
Ka/Ks Ratio 0.3244 (Ka = 0.0156, Ks = 0.0481)

PALMD ENSBTAG00000017655 (Cow)

Gene Details

palmdelphin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023485, Cow)

Protein Percentage 91.75%
cDNA percentage 93.02%
Ka/Ks Ratio 0.23952 (Ka = 0.0398, Ks = 0.1662)

PALMD  (Minke Whale)

Gene Details

palmdelphin

External Links

Gene match (Identifier: BACU002784, Minke Whale)

Protein Percentage 96.84%
cDNA percentage 98.45%
Ka/Ks Ratio 0.79061 (Ka = 0.0128, Ks = 0.0161)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1449 bp    Location:83034..62201   Strand:-
>bmy_17398
ATGGAGAAACAAAATCAACAAGACCAGCACCAGATCCAGGTTCTAGAACAAAGTATCCTCAGTAATATAAAGTATATCTTTTTGTTCAGACTTGAGAAAGAGATCCAAGATCTTGAAAAAGCTGAACTGCAAATCTCAACCAATGAAGAGGCAATTTTAAAGAAACTAAAATCAGTTGAGAGGACAACAGAAGACATAATACGGTCTGTGAAGGTGGAAAAGGAAGAAACATCAGGAGAGTCAATTGAAGACATCTATGCTAATATCCCTGACCTTCCAAAATCCTACATACCTTCCAGATTAAGGAAGGAAAGAAATGAAGGAATAGAAGATGATGAACAAAATAGAAAAGCTTTGTATGCCATGGAAATCAAAGTTGAAAAAGACTTGAAGACCGGAGAAAGTACAGTCCTGTCTTCAATACCTCTCCCATCAGATGACTTTAAAGGTACAGGGATAAAAGTTTATGACGACGGGCAAAAGTCAGTGTATGCAGTAAGCTCTAATCACAGTGCAGCATACAACGGCACCGACGGCCTGGCACCAGTTGAAGTAGAGGAACTTATAAGACAAGCTTCAGAGAGAAATTCTAAATCCCCAACAGAGTATCATGAGCCTGTATATGCCAATCCATTTTGCAGACCTACAACTCCACAGAGAGAGAAGGTAACTCCTGGACCAAACTTTCAAGAAAGGATAAAGATTAAAGCTAATGGACTGGGTAATGATGTGAATAGATCCACACGCAACATGGACAATGGACTTTCAGAGGAGAGCGGCAACAGCTTCAATCACATCAGTCCCGTTCGGCCAATACCTCAACCCCGGTCAATGACTCAACAAGCAGAGAAGACACCCCACACCCAGCAGAAGAGGCTGATGACTCCTTGGGAAGAATCAGATGTAATGCACGACAGGTATGCTCCCTCTCCAAAGGCGGGACTGAGTCCCAGSGAAGCACTAGTTGGGAAGTCAGAACGCCAGCGTTCTTCACCTACTTGCCAGGAGGATGAGGAAGACATTMGATATAATATCGTTCATTCCCTGCCTTCTGACATGGATGAGAAAGAACCCGTGACGATGATTTTCATGGGTTATCAGCAGGCAGAAGACAATGAGGAAGAAAAGAATCTTCTGATGGGATATGACGGGGTCATCCATGCTGAGCTGGTTGTGATTGATGATGAGGAGGAGGAGGGTGAAGGAGAAGCTGAGAAACTATCCTACCATCCCATAGCTCCCTACAGTCAGGTTTTCCAGCCTGCCAAACCAACACCACTTCCAAGAAAGAGATCAGAAGTTAATCCCCATGAAAACAMAAACCATAAATCTCCCCACAAAAATTCCATATCCCTGAAGGAGCAAGAAGAAAGCTTAGGCAGCCCTGTCCACCATTCTCCACTTGACGTTCAGATAGCAGGAGATGGGACTGAGGATCCCTCCTTAACA

Related Sequences

bmy_17398T0 Protein

Length: 483 aa      View alignments
>bmy_17398T0
MEKQNQQDQHQIQVLEQSILSNIKYIFLFRLEKEIQDLEKAELQISTNEEAILKKLKSVERTTEDIIRSVKVEKEETSGESIEDIYANIPDLPKSYIPSRLRKERNEGIEDDEQNRKALYAMEIKVEKDLKTGESTVLSSIPLPSDDFKGTGIKVYDDGQKSVYAVSSNHSAAYNGTDGLAPVEVEELIRQASERNSKSPTEYHEPVYANPFCRPTTPQREKVTPGPNFQERIKIKANGLGNDVNRSTRNMDNGLSEESGNSFNHISPVRPIPQPRSMTQQAEKTPHTQQKRLMTPWEESDVMHDRYAPSPKAGLSPXEALVGKSERQRSSPTCQEDEEDIRYNIVHSLPSDMDEKEPVTMIFMGYQQAEDNEEEKNLLMGYDGVIHAELVVIDDEEEEGEGEAEKLSYHPIAPYSQVFQPAKPTPLPRKRSEVNPHENXNHKSPHKNSISLKEQEESLGSPVHHSPLDVQIAGDGTEDPSLT