Sequence detailsbmy_17406 (Coding sequence)

Part of scaffold_1512 (SequenceType object (1))

For more information consult the page for scaffold_1512 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CICENSTTRG00000013873 (Bottlenosed dolphin)

Gene Details

capicua transcriptional repressor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013161, Bottlenosed dolphin)

Protein Percentage 80.2%
cDNA percentage 80.14%
Ka/Ks Ratio 0.22851 (Ka = 0.0115, Ks = 0.0505)

CICENSBTAG00000019785 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000054105, Cow)

Protein Percentage 95.07%
cDNA percentage 92.69%
Ka/Ks Ratio 0.12156 (Ka = 0.0276, Ks = 0.2272)

Additional orthologs identified in other species via the OPTIC pipeline.

CIC (Human)   Cic (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4911 bp    Location:174377..163282   Strand:-
Raw sequence 
>bmy_17406
ATGTACTCAGCCCACAGGCCCCTGGTGCCCGCGTCCGGCGCGGCCTCCCGTGGCCTCGGCATGTTCGTGTGGACGAACGTGGAACCTCGCTCTGTGGCCGTGTTCCCCTGGCATTCCTTAGTCCCCTTCCTGGCCCCCAGCCAGCCTGACCCCTCCGTGCAGCCAAGTGAGGCCCAGCAACCTGCTAGCCACCTAGTGGCCTCCAACCAGAGCAAAGAACCTGCTGAGTCGGCGGCTGTTGCTCACGAGCAGCCACCAGGCGGGACGGGGAATGCTGACCCCGGGCGGCCCCCTGGAGCTACGTGCCCTGAGAGCCCAGGGCCCGGACCTCCCCACACTTTGGGGGTGGTGGAACCTGGAAAGGGCCCCCTTCCCACCACGGAGGAGGAGGCCCCTGGTCCTCCAGGAGAGCCCCGGCTGGACAGTGAGACAGAGAGTGACCACGACGATGCCTTCCTCTCCATCATGTCTCCTGAGATCCAGTTGCCTCTGCCGCCTGGGAAACGCCGGACGCAGTCTCTCAGCGCCCTGCCCAAGGAACGAGACTCATCTTCAGAGAAGGATGGACGCAGCCCCAACAAGAGGGAGAAGGACCATATCCGGCGGCCCATGAATGCCTTCATGATCTTCAGCAAGCGGCACCGGGCCCTGGTCCACCAGCGTCACCCCAACCAGGACAACCGGACCGTCAGTAAGATCCTGGGCGAGTGGTGGTACGCTCTGGGGCCCAAGGAGAAGCAGAAGTACCACGACCTGGCCTTCCAGGTGAAAGAGGCCCACTTTAAGGCCCACCCAGACTGGAAGTGGTGCAACAAGGACCGGAAGAAGTCCAGCTCAGAGGCCAAGCCTACAAGCCTGGGGCTGGCAGGAGGGCACAAGGAGCCAAGGGAGCGGAGCATGTCGGAGACAGGCACCGCCGCTGCCCCTGGAGTGTCCTCGGAGCTCCTGTCCGTCACAGCCCAGACGCTCTTGAGCTCGGACACCAAGGCTCCGGGGAGCAGCTCCTGTGGGGCAGAACGTCTGCACGCAGTCGGCGGACCTGGCTCAGCCCGGCCCCGAGCCTTCTCCCACAGCGGGGTCCACAGCCTGGATGGCGGGGAAGTAGACAGCCAGGCACTACAGGAACTGACTCAGATGGTGTCTGGCCCTGCATCCTACTCTGGCCCAAAGCCTTCCACCCAATATGGGGCTCCAGGCCCCTTTGTGGCCCCCGGTGAGGGAGGCACTCTGGCAGCCAGTGGGCGGCCCCCACTGCTGCCCACCCGGGCCTCCCGTTCCCAGCGTGCAGCCAGTGAGGACATGACCAGTGACGAGGAACGCATGGTCATCTGTGAGGAGGAAGGGGATGACGATGTCATTGCTGACGATGGCTTCAGCACCACTGACATTGACCTCAAGTGCAAGGAGCGGGGCTTTGGTCGGAAGGTGTTCTCGCCTGTGATCCGTTCCTCCTTTACTCACTGCCGTCCATCACTGGACCCTGAGCCCCCAGGGCCCCCAGATCCACCTGCAGGCTTCGGCAAAGGCTACGGACCCACCCCATCCTCCTCATCCTCGCCTGCCTCCTCCTCAGCCTCAGCAGCCACCTCCTTCCCGCTGGGCTCAGGGACCTTCAAGGCCCAGGAGTCAGGTCAGGGCAGCACAACAGGTCCCCTGCGGCCCCCACCCCCTGGAACTGGGGGCCCAGCAACACCTAAGGCCACCCGGTTTCTCCCCACGGATCCTGCCACCTTCCGGCGCAAGAGACCTGAAAGCGTGGGGGGCCTGGAGCCACCAGGCCCCTCAGTCATTGCGGCACCTCCCAGCGGGGGAGGAAGTGTTCTGCAGACACTGGTCCTGCCCTCAAACAAGGAGGAACGGGAGGGCAGTGGAGCTCGCATGCCCTCGGCCCCAGCCCCATCGCTGGCCTATGGGGCCCCAGCAGCCCCCCTGTCCCGCCCGGCCGCCACCATGGTCACCAATGTGGTGCGGCCTGTCAGCAGCACTCCTGTGCCCATCGCCTCTAAGCCTTTCCCCACTTCTGGCCGGGCAGAAGCGCCTCCAAATGACACAGCCGGTGCCAGGACTGAGACAGTCGCTGGGTCCCGGGCACCTGGGGGCTCCCCACTGGGCGTCAGCTTAGTGTATTCGGACAAGAAGTCGGGAGCAGCCACCTCAACAGCCCCACATCTGGTGGCTGGACCCCTACTGGGCACTGTGGGGAAGGCGCCTGCCACTGTCACCAACCTGCTGGTGGGCGCCCCGGGCTATGGGGCCCCAGCGCCCCCCGCTGTCCAGTTCATTGCCCAGGGGGGCCCTGGCAGCGGGACGGCTGCGGGCTCAGGAGCAGGTGCTGGGAGTGGGCCCAATGGGCCAATGCCCCTGGGCATCCTGCAGCCGGGTCCCCTGGGCAAGGCTGGGGGAATCACCCAGGTGCAGTACATTCTGCCCACGCTGCCCCAGCAACTTCAAGTGGCGCCTGCCCCAGCACCAGCCCCTGGGACCAAGGCAGCGGCTCCCAGCGGCCCTGCACCCACCACCAGCATCCGTTTCACCCTCCCGCCGGGCACCTCCACCAACGGCAAAGTCCTGGCTGCCACCGCACCCACTCCTGGCATCCCCATCCTGCAGTCCGTACCCTCCGCCCCGCCCCCCAAAGCCCAGTCAGTTTCTCCTGTGCAGGCCCCACCCCCGGGTGGCTCAGCCCAGCTGCTACCTGGGAAGGTACTAGTGCCCTTGGCCACCCCTAGCATGTCAGTGCGGGGAGGAGGGGCCGGCCAGCCGCTGCCCCTGGTGAGCCCACCCTTCTCAGTACCTGTGCAGAACGGTGCTCAGCCACCCAGCAAGATCATCCAGCTGACTCCAGTGCCTGTGAGCACACCCGGCGGCCTGGTGCCGCCCCTCAGCCCGGCCACGCTCCCCGGACCCGCCTCGCAGCCTCAGAAGGTTCTGCTGCCCTCCTCCACCAGAATCACCTACGTGCAGTCAGCAGGCGGGCATGCGCTGCCCCTGGGCACCGGTCCTGCGTCCAGTCAGGCTGGAACAGTCACCTCGTACGGACCCACGAACTCAGTAGCCCTAGGCTTCACCTCGCTGGGGCCCAGCGGCCCCGCCTTCGTGCAGCCCCTGCTTTCAGGCCAAGCCCCATTGCTGGCTCCTGGCCAGGTGGGCGTGTCACCCGTGCCCAGCCCCCAGCTGCCTCCCACCTGCGCAGCCCCCAGTGGTCCCGTCATCACAGCGTTTTACCCTGGCAGCCCCGTACCCACCTCCTCAGCACCCCTGGCCCAGCCATCCCAGGCCCCCCCCGGCCTGGTCTACACCGTGGCCACCAACACCACCCCACCTGCTGCCACCATCCTGCCCAAGGGCCCACCGGCCCCCGCCACTGCCACCCCGGCCCCTACCAGCCCTTTCCCTAGTGCCACAGGTGGGTGTCGGGCCAACCGAGGGTGGGGTGAGTGGGGAGACCCAGGGGATGGGCTCCAGTCAAGCCTGGCTCAGCGAATACTCTCTTTACCAGCAGGCTCCATGACCTACAGTTTAGTGGCCCCCAAGGCCCAGCGGCCCACCCCCAAGGCCCCCCAGAAAGTGAAGGCGGCCATCGCCAGCATTCCCGTGGGCTCCTTTGAGGCAGGTGCCCCTGGGCGGCCAGGCCCTGCGCCCCGGCAGCCGTTGGAGCCTGGCCCAGCTCGTGAGCCCCCTGCATCCGAGTCAGAGCTTGAGGGGCGGCCAACAACACCAGCCCCTCCACTGCCCCCAGAGACCTGGGCTCCCCCGGCCCGGAGCAGTCCCCCGCCGCCCCCACCTGCTGAGGAGCGGACCAGTGCCAAGGGCCCTGAGACCATGGTGAGTCTGAACCCAGTGTCCTCCATCTCCCTGCCATCCTCACCCCAGGCCAGCAAATTCCCCAGCTCATCTTCAGACTGGCGTGTCCCCGGGCTGGGCCTGGAGAGCCGAGGGGAGCCTCCCACCCCTCCCAGTCCGGCTCCGGCTCCAGCCCCAGCCCCTGGTAGCAGCGGCAGCAGCAGTGAGGGCAGCAGTGGGAGGGCAGCTGGGGACACCCCCGAGCGCAAGGAGGCGGCTAGTGCTGGCAAGAAGGTCAAGGTGCGGCCCCCGCCCCTGAAGAAGACCTTTGACTCTGTGGACAAGGTCCTGTCGGAGGTGGACTTCGAAGAGCGCTTTGCTGAGCTGCCCGAGTTTCGGCCTGAGGAGGTCTTGCCTTCGCCCACCCTGCAGTCTCTGGCCACCTCACCCCGGGCCATCCTGGGCTCCTACCGCAAGAAGAGGAAGAACTCCACTGACCTGGACTCAGCCCCCGAGGACCCCACCTCGCCCAAGCGTAAGATGAGGAGACGCTCCAGTTGCAGCTCGGAGCCCAACACCCCCAAGAGTGCCAAGTGCGAGGGGGACATCTTCACTTTTGACCGTACAGGTACAGAAGCTGAGGATGTGCTCGGGGAGCTGGAATACGAGAAGGTGCCATACTCGTCGCTGCGGCGCACCCTGGACCAGCGCCGGGCCCTTGTCATGCAGCTCTTCCAGGACCATGGCTTCTTCCCATCAGCCCAGGCCACGGCAGCCTTCCAGGCCCGCTACGCAGACATCTTCCCCTCTAAGGTCTGTCTGCAGCTGAAGATCCGTGAGGTGCGCCAGAAGATCATGCAGGCGGCCACTCCCACGGAGCAGCCCCCGGGAGCCGAGGCCCCCCTCCCTGGACCGCCCCCCACTGTCACTGCTGCTGCCCCTGTCCCCACTCCCAGTCCTGCTGGGGGCCCTGACCCCACCTCACCTGGCTCGGACTCTGGCACGGCCCCGGCTGCCCCGCCATTGCCTCCGCCCCCAGAGCCGGGGCCCGGACAGCCTGGCTGGGAGGGGCCCCCCCAACCCTCACCACCCCCCTCTGGTCCCTCCACAGCTGCCACAGGCAGGTGA

Related Sequences

bmy_17406T0 SequenceType object (3)

Length: 1637 aa      View alignments
>bmy_17406T0
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQPASHLVASNQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPGPPHTLGVVEPGKGPLPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKEPRERSMSETGTAAAPGVSSELLSVTAQTLLSSDTKAPGSSSCGAERLHAVGGPGSARPRAFSHSGVHSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFVAPGEGGTLAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERGFGRKVFSPVIRSSFTHCRPSLDPEPPGPPDPPAGFGKGYGPTPSSSSSPASSSASAATSFPLGSGTFKAQESGQGSTTGPLRPPPPGTGGPATPKATRFLPTDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGSVLQTLVLPSNKEEREGSGARMPSAPAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEAPPNDTAGARTETVAGSRAPGGSPLGVSLVYSDKKSGAATSTAPHLVAGPLLGTVGKAPATVTNLLVGAPGYGAPAPPAVQFIAQGGPGSGTAAGSGAGAGSGPNGPMPLGILQPGPLGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLATPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVPVSTPGGLVPPLSPATLPGPASQPQKVLLPSSTRITYVQSAGGHALPLGTGPASSQAGTVTSYGPTNSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSPQLPPTCAAPSGPVITAFYPGSPVPTSSAPLAQPSQAPPGLVYTVATNTTPPAATILPKGPPAPATATPAPTSPFPSATGGCRANRGWGEWGDPGDGLQSSLAQRILSLPAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRPGPAPRQPLEPGPAREPPASESELEGRPTTPAPPLPPETWAPPARSSPPPPPPAEERTSAKGPETMVSLNPVSSISLPSSPQASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPGSSGSSSEGSSGRAAGDTPERKEAASAGKKVKVRPPPLKKTFDSVDKVLSEVDFEERFAELPEFRPEEVLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTVTAAAPVPTPSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPSGPSTAATGR*