Sequence detailsbmy_17412 (Coding sequence)

Part of scaffold_1512 (SequenceType object (1))

For more information consult the page for scaffold_1512 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POU2F2ENSTTRG00000008331 (Bottlenosed dolphin)

Gene Details

POU class 2 homeobox 2

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007892, Bottlenosed dolphin)

Protein Percentage 77.06%
cDNA percentage 78.22%
Ka/Ks Ratio 0.34133 (Ka = 0.052, Ks = 0.1522)

POU2F2ENSBTAG00000008556 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011279, Cow)

Protein Percentage 89.92%
cDNA percentage 89.48%
Ka/Ks Ratio 0.22824 (Ka = 0.0704, Ks = 0.3084)

POU2F2 (Minke Whale)

Gene Details

POU class 2 homeobox 2

External Links

Gene match (Identifier: BACU002063, Minke Whale)

Protein Percentage 94.01%
cDNA percentage 94.76%
Ka/Ks Ratio 0.29781 (Ka = 0.0376, Ks = 0.1263)

Additional orthologs identified in other species via the OPTIC pipeline.

POU2F2 (Human)   Pou2f2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1206 bp    Location:328759..335128   Strand:+
Raw sequence 
>bmy_17412
ATGCCAGCCTGCCCTGTGGCGCACCCCCCCGGGGCTCAGGCGATGCAGAGGGAAGAGCCGGGCCAGGACTCAGGCTGTCGTTCTGTCCACCCCCCTCCCTGCCAGGACATCCAGCAGCTCCTCCAACTTCAGCAGCTGGTGCTCGTGCCGGGTCACCACCTCCAGCCACCTGCTCAGTTCCTGCTGCCGCAGGCCCAGCAGAGTCAGCCAGGCCTGCTACCGACGCCAAATCTATTCCAGCTACCTCAGCAAACCCAGGGAGCTCTTCTGACCTCCCAGCCCCGGGCGGGGCTGCCCACACAGGCCGTGACCCGCCCCACGCTGCCCGACCCGCACCTCTCGCACCCGCAGCCCCCCAAATGCTTGGAGCCACCATCCCATCCCGAGGAGCCCAGTGACCTGGAGGAGCTGGAGCAGTTCGCTCGCACCTTCAAGCAACGCCGCATCAAGCTGGGCTTCACGCAGGGTGACGTGGGTCTGGCCATGGGCAAGCTCTACGGCAACGACTTCAGCCAGACGACCATCTCCCGCTTCGAGGCCCTCAACCTGAGCTTCAAGAACATGTGCAAACTCAAGCCTCTCCTGGAGAAGTGGCTCAACGACGCAGAGACTATGTCTGTGGACTCAAGCCTGCCCAGTCCCAACCAGCTGAGCAGTCCCAGCCTGGGTTTCGACGGGCTCCCTGGCCGGAGACGCAAGAAGAGGACCAGCATCGAGACAAACGTCCGCTTCGCCTTAGAGAAGAGTTTTCTAGCGAACCAGAAGCCTACCTCAGAGGAGATCCTGCTGATCGCAGAGCAGCTGCACATGGAGAAGGAAGTGATCCGCGTCTGGTTCTGCAACCGGCGCCAGAAGGAAAAACGCATCAACCCCTGCAGCGCGGCCCCCATGCTGCCCAGCCCGGGCAAGCCAGCCAGCTACAGCCCCCATCTGGTCACGCCCCAAGGGGGCGCCGGGACCCTGCCGTTGTCCCAAGCTTCCAGCAGTCTGAGCACAACAGTTACTACCTTATCCTCAGCTGTGGGGACCCTCCACCCCAGCCGGACAGCTGGAGGGGGTGGGGCCGGGGGCGGGGCCGTGCCCCCCCTCAATTCCATCCCCTCTGTCACTCCCCCACCCCCGGCCACCACCAACAGCACAAATCCCAGCCCTCAAGGCAGCCACTCGGCTATCGGCTTGTCGGGCCTGAACCCCAGCACGGGGTAA

Related Sequences

bmy_17412T0 SequenceType object (3)

Length: 402 aa      View alignments
>bmy_17412T0
MPACPVAHPPGAQAMQREEPGQDSGCRSVHPPPCQDIQQLLQLQQLVLVPGHHLQPPAQFLLPQAQQSQPGLLPTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDPHLSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRINPCSAAPMLPSPGKPASYSPHLVTPQGGAGTLPLSQASSSLSTTVTTLSSAVGTLHPSRTAGGGGAGGGAVPPLNSIPSVTPPPPATTNSTNPSPQGSHSAIGLSGLNPSTG*