Sequence detailsbmy_17419 (Coding sequence)

Part of scaffold_1512 (SequenceType object (1))

For more information consult the page for scaffold_1512 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ARHGEF1ENSTTRG00000008288 (Bottlenosed dolphin)

Gene Details

Rho guanine nucleotide exchange factor (GEF) 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007856, Bottlenosed dolphin)

Protein Percentage 72.03%
cDNA percentage 72.07%
Ka/Ks Ratio 0.20483 (Ka = 0.0315, Ks = 0.1538)

ARHGEF1ENSBTAG00000018912 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025175, Cow)

Protein Percentage 87.4%
cDNA percentage 88.53%
Ka/Ks Ratio 0.15474 (Ka = 0.067, Ks = 0.4328)

Additional orthologs identified in other species via the OPTIC pipeline.

ARHGEF1 (Human)   Arhgef1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3336 bp    Location:502951..484094   Strand:-
Raw sequence 
>bmy_17419
TCCTGCCCCGCCAGAGCCAGGAAGCGGGAGCCGGGACACCGGGCCCGGGATCGCCGAGCCCGACCTCGGGCGCCCCGCCGGTCACCTCCCCGCGCGGACACCAGCCCTGCAGAGCCCATGGAGGCCGAAGACGTCGCCCGAGGGGCGGCCCCAGGGCCACCCCGGCCCGGCCTGGTGCCCGTCAGCATCATTGGGGCTGAGGACGAGGATTTTGAGAATGAGCTGAAGACGAACCCCGAGGAGCAAAACAACCAGTTCCAGAGCCTGGATCAGGTGAAGCGGCGCCCGGCCCACCTCATGGCCCTCCTGCAGCACGTGGCCATGCAGTTCGAGCCAGGACCCCTGCTCTGCTGCCTGCACGCGGACATGTTGGGCTCACTGGGCCCCAAGGAGGCCAAGAAGGCCTTCGGCGACTTCTGCCACAGCTTCCTGGATAAGTGTGCGATTCTGCGGGTGTCGGTCCCTCCCACCGTGGCCTTTGAACTTGGTAAGGAGAGGAGAGGGGATTTTGGGATGAGTAAGAGTTCTCTAGCAGGGACCAGGAGCCCCCCGGGAGGGAGGCCGCACTCTCATGCTCCCAGGACGGGATTGTTCTTCCTTCTTCATGGCCACCACAGCCCAAGGAAGCATAGCTGTCAGAGTCGAAGGGTGGGAGGGGAGTCACAGCCCAGGGAACTGGCCCCTGTCCCTGCAGACCGCACGCGGCCCGATCTCCTCTCCGAGGATGTCCAGCGGCAGTTCGTGCAGGAGGTGGTGCAGACCCAGCAGGCAGCCGTCAGCCGGCAGCTGGAGGACTTCCGCTCCAAGAAGCTCATGGGCATGACGCCCTGGGAGCAGGAGCTGATCCAGCTGGGGGCCTGGGTTGGGCGGGACCGCGCCAGCTATGAGGCCCGGGAGCGGCACCTGGCCGAGCGGCAGCTGACCCACCTGGAGGAGATGCAACACACCATCTCTAACGATGAGGAAAAGAGTGCTGCCGTGGTCAGCGCCATCACCTTGTACATGCGCCACCTCGGGGTGCGGACCAAGAGTGGGGACAAGAAGTCGGGGAGGAATTTCTTCCGGAAAAAGGTGATGGGGAACCGGCGGTCAGAAGAACCGACCAAGACCAAGAAAGGACTGAGCAGCTTCCTGGATGCCGCCCGCTGGAACCGGGGAGAGCCCCAGGGTGAGAAGCCAGGCCTTACAGAACGTAAGGGAGGTCTGGGGGTGCCCTCCCGGGACCGGAATGTCGGAGCCCCTGGGCAGGACACCCCCGGAGTTCCTCTGCACCCTCTGTCTGGGGACAGCCCTGACCGGGAACCAGGTGTTGATGCCCTCCCCGAGCTGGGGGACCCGCCCCCGCAGGGCCCGGCCAGCCTGGAGCCTGCAGCGCCCCTGGAGAGCACAGAGGAGGGTGCTGACACGGAGAGGTGCCCAGGGCCGGGTGCAGGGGAGGTGCCGGGCGCAGGACCGGGCTTATCCAGTGCAGGGAGGTTGGGGGGCAGGCTCTGCCCCCTGCCTGTCCTTGTGCCGCTGCTTTGGGGACCCTTTGGCGGGTGGGGGAGGCTGTCGGGGCGTCTGGGGCGCTCGGAGAGCCTGCGGGTGAGTGACCGCCGCCGGCCTTCCCGGGGCAGCCTCGGGGCTAAGGGCCGGGGTGGGGGCCGCTCCCGGAGCGACGTGGACATGGACCCCAGCTCCGCCACGGCCGTGCTTGGCCCTGCCCGACGAGCCACCCCCGAGCCTGGAGATGAGGGGGAGCCGGGCCGATCGGGACTAGAGCTGGAGCCAGAAGAGCCCCCCGGCTGGCGGGAGCTCGTCCCCCCGGGCACCCTGCACAGCCTTCCCAAGAGCCAGGTGAAGCGGCAGGAGGTCATCAGCGAGCTGCTGGTGACAGAGGCGGCCCACGTGCGCATGCTCCGGGTGCTATATGACCTCTTCTACCAGCCCATGGCGGATGGGGGCTTCTTCTCCCTGGAGGAGCTACAGAACATCTTCCCCAGCCTGGACGAGCTCATCGAGGTGCATTCCCTGTTCCTTGATCGCCTGATGAAGCGGAGGCAGGACAGTGGCTACCTCATTGAGGAGATCGGAGATGTGCTGCTGGCCCAGTTTGATGGTACCGAGGGCTCCTGGTTCCAGAAAATCTCCTCCCGCTTCTGCAGCCGCCAGTCGTTTGCCTTAGAGCAGCTCAAAGCCAAACAGCGCAAGGAGCCTCGGTTCTGCGCCTTTGTGCAGGAGGCCGAGAGCCGCCCCCGGTGCCGCCGTCTGCAGCTGAAGGACATGATCCCCACGGAGATGCAGCGTCTGACCAAGTACCCGCTGCTCCTGCAGAGCATCGGGCAGAACACAGAAGARCCTGCGGAACGGGAGAAAGTGGAGCTGGCGGCTGAGTGCTGCAGGGAAATTCTGCACCACGTCAACCAAGCCGTGCGCGATATGGAGGACCTGCTGCGGCTCAAGGATTATCAGCGGCGCCTGGATTTGTCCCACCTGCGGCAGAGCAGCGACCCCATGCTGAGCGAGTTCAAGAACCTGGACATCACCAAGAAGAAGCTGGTCCATGAGGGCCCGCTGACGTGGCGGGTGACTAAGGACAAGGCTGTGGAGGTCCACGTCCTGCTGCTGGACGACCTCCTGCTGCTGCTTCAGCGCCAGGATGAGCGGCTGCTGCTCAAGTCGCACAGCCGGACGCTGACGCCCACACCCGACGGCAAGACCATGCTGCGGCCGGTGCTGCGGCTCACCTCCGCCATGACCCGAGAGGTGGCCACTGATCACAAAGCCTTCTATGTCATTTTTACCTGGGACCAGGAGGCCCAGATATACGAGCTGGTGGCCCAGACCGTGTCGGAGCGGAAGAACTGGTGTGCCCTCATCACTGAGACCGCCGGATCCCTGAAGGTCCCTGCCCGCACCTCCCGACCCAAACACCGGCCCAGCCCCAGCAGCACCCGTGAACCCCTGCTCAGCAGCTCTGAGAACGGCAACGGTGGCCGAGAGATGCCCCCGGCTGACGGCCGGATGGAGAGAATCTTCAGCGCCCTCCTGCCCTTCTGTAGACCAGGCCCTGAGGGCCAGCTCGCCGCCAAGGCCCTTCAGAAAGTGCTGTCCCTGAAGCAGCTCCTGCTCCCCTCGGAGGAGGACAGCGGGGTGGGGCCGCTGCTCGAAGGCGATGGAGTCCCAGGGGGCGGCCCCCMAAGCCCAGCACAGCCCCAGGAAATTCGGGAGGAACTGCTCAGCCTGGAGGAGACCATTAAACAGCTGGAGGTGGTGGCCTTGCGGCCTTTTCGCAAGAAGGAGAGGGCCACCCGCCACTGCACAGCTGCCGCAGCATCTCCAACCCCAAGGGCCTGA

Related Sequences

bmy_17419T0 SequenceType object (3)

Length: 1112 aa      View alignments
>bmy_17419T0
SCPARARKREPGHRARDRRARPRAPRRSPPRADTSPAEPMEAEDVARGAAPGPPRPGLVPVSIIGAEDEDFENELKTNPEEQNNQFQSLDQVKRRPAHLMALLQHVAMQFEPGPLLCCLHADMLGSLGPKEAKKAFGDFCHSFLDKCAILRVSVPPTVAFELGKERRGDFGMSKSSLAGTRSPPGGRPHSHAPRTGLFFLLHGHHSPRKHSCQSRRVGGESQPRELAPVPADRTRPDLLSEDVQRQFVQEVVQTQQAAVSRQLEDFRSKKLMGMTPWEQELIQLGAWVGRDRASYEARERHLAERQLTHLEEMQHTISNDEEKSAAVVSAITLYMRHLGVRTKSGDKKSGRNFFRKKVMGNRRSEEPTKTKKGLSSFLDAARWNRGEPQGEKPGLTERKGGLGVPSRDRNVGAPGQDTPGVPLHPLSGDSPDREPGVDALPELGDPPPQGPASLEPAAPLESTEEGADTERCPGPGAGEVPGAGPGLSSAGRLGGRLCPLPVLVPLLWGPFGGWGRLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSATAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPPGTLHSLPKSQVKRQEVISELLVTEAAHVRMLRVLYDLFYQPMADGGFFSLEELQNIFPSLDELIEVHSLFLDRLMKRRQDSGYLIEEIGDVLLAQFDGTEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEAESRPRCRRLQLKDMIPTEMQRLTKYPLLLQSIGQNTEEPAEREKVELAAECCREILHHVNQAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKAVEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVIFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKVPARTSRPKHRPSPSSTREPLLSSSENGNGGREMPPADGRMERIFSALLPFCRPGPEGQLAAKALQKVLSLKQLLLPSEEDSGVGPLLEGDGVPGGGPXSPAQPQEIREELLSLEETIKQLEVVALRPFRKKERATRHCTAAAASPTPRA*