Part of scaffold_1513 (Scaffold)

For more information consult the page for scaffold_1513 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP16 ENSTTRG00000003390 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 16 (membrane-inserted)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003178, Bottlenosed dolphin)

Protein Percentage 81.37%
cDNA percentage 81.14%
Ka/Ks Ratio 0.21083 (Ka = 0.0119, Ks = 0.0564)

MMP-16 ENSBTAG00000006877 (Cow)

Gene Details

matrix metalloproteinase-16

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053634, Cow)

Protein Percentage 98.07%
cDNA percentage 94.91%
Ka/Ks Ratio 0.07119 (Ka = 0.0131, Ks = 0.1843)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1713 bp    Location:160066..363987   Strand:+
>bmy_17434
ATGCAGACACAGTTGACGTGTGTTTGGTTACAGAAGTACGGCTACCTTCCACCGACTGACCCCAGAATGTCGGTGCTGCGCTCTGCAGAGACCATGCAGTCTGCCTTAGCTGCCATGCAGCAGTTCTATGGCATTAACATGACAGGAAAAGTGGACCGAAACACAATTGACTGGATGAAGAAGCCTCGATGTGGTGTACCTGACCAGACAAGAGGTAGCTCCAAATTTAATATTCGTCGAAAGCGGTATGCGTTAACAGGACAGAAGTGGCAGCACAAACACATCACTTACAGTATAAAGAACGTAACTCCAAAAGTAGGAGACCCTGAAACCCGTAAAGCTATTCGTCGTGCGTTTGACGTGTGGCAGAATGTAACTCCTCTGACGTTTGAAGAAGTTCCCTACAGTGAATTAGAAAATGGCAAACGTGATGTGGATATAACCATCATATTTGCATCTGGCTTTCATGGAGACAGTTCTCCCTTTGATGGAGAGGGAGGGTTTTTGGCACATGCCTATTTCCCTGGACCAGGAATTGGGGGAGATACTCATTTTGACTCAGATGAGCCATGGACACTAGGAAATCCTAATCATGATGGAAATGACTTATTTCTTGTAGCGGTTCATGAACTGGGACATGCTCTGGGACTGGAGCATTCCAATGACCCTACTGCCATCATGGCTCCATTTTACCAGTACATGGAAACTGACAACTTCAAACTACCTAATGATGATTTGCAGGGCATCCAGAAAATATATGGTCCACCTGACAAGATTCCTCCACCAACAAGACCTCTACCGACAGTGCCCCCACACCGCTCTAATCCTCCAGCTGACCCAAGGAAGAATGACCGGCCCAAACCTCCCCGGCCTCCCACTGGCAGACCTTCCTATCCTGGAGCCAAACCCAACATCTGTGATGGGAACTTTAACACTCTAGCTATTCTTCGCCGTGAGATGTTTGTTTTCAAGGACCAGTGGTTTTGGCGAGTGAGAAACAACAGGGTGATGGATGGATACCCCATGCAAATTACTTACTTCTGGCGGGGCTTGCCTCCTAGTATCGATGCAGTTTATGAAAACAGTGATGGAAATTTTGTCTTCTTTAAAGGTAACAAATATTGGGTGTTCAAGGACACGACTCTTCAACCTGGTTACCCTCATGACTTGATTACTCTTGGAAGCGGAATTCCCCCTCATGGTATTGATTCAGCCATTTGGTGGGAGGACGTTGGGAAAACCTATTTCTTCAAGGGGGACAGGTATTGGAGATATAGTGAAGAAATGAAAACCATGGATCCTGGCTATCCCAAACCAATCACAGTCTGGAAAGGTATCCCCGAATCTCCTCAGGGAGCCTTTGTGCACAAAGAAAATGGCTTTACATATTTCTACAAAGGAAAGGAGTATTGGAAATTCAACAACCAGATACTCAAGGTAGAACCTGGATATCCCAGATCCATCCTCAAGGATTTTATGGGCTGTGATGGACCAACAGACAGAGATAAAGAAGGACACAGCCCACCAGATGATGTAGACATTGTCATCAAACTGGACAACACAGCCAGCACTGTGAAAGCCATAGCTATTGTCATTCCCTGCATCTTGGCCTTATGCCTCCTTGTATTGGTTTACACTGTGTTCCAGTTCAAGAGGAAAGGAACACCCCGCCACATACTGTACTGTAAACGCTCTATGCAAGAGTGGGTGTGA

Related Sequences

bmy_17434T0 Protein

Length: 571 aa      View alignments
>bmy_17434T0
MQTQLTCVWLQKYGYLPPTDPRMSVLRSAETMQSALAAMQQFYGINMTGKVDRNTIDWMKKPRCGVPDQTRGSSKFNIRRKRYALTGQKWQHKHITYSIKNVTPKVGDPETRKAIRRAFDVWQNVTPLTFEEVPYSELENGKRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGNDLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMETDNFKLPNDDLQGIQKIYGPPDKIPPPTRPLPTVPPHRSNPPADPRKNDRPKPPRPPTGRPSYPGAKPNICDGNFNTLAILRREMFVFKDQWFWRVRNNRVMDGYPMQITYFWRGLPPSIDAVYENSDGNFVFFKGNKYWVFKDTTLQPGYPHDLITLGSGIPPHGIDSAIWWEDVGKTYFFKGDRYWRYSEEMKTMDPGYPKPITVWKGIPESPQGAFVHKENGFTYFYKGKEYWKFNNQILKVEPGYPRSILKDFMGCDGPTDRDKEGHSPPDDVDIVIKLDNTASTVKAIAIVIPCILALCLLVLVYTVFQFKRKGTPRHILYCKRSMQEWV*