Sequence detailsbmy_17476 (Coding sequence)

Part of scaffold_1539 (SequenceType object (1))

For more information consult the page for scaffold_1539 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.29621ENSBTAG00000048112 (Cow)

Gene Details

glutathione peroxidase 2

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000055144, Cow)

Protein Percentage 83.09%
cDNA percentage 84.56%
Ka/Ks Ratio 0.23321 (Ka = 0.1208, Ks = 0.5178)

GPX2 (Minke Whale)

Gene Details

glutathione peroxidase 2 (gastrointestinal)

External Links

Gene match (Identifier: BACU010739, Minke Whale)

Protein Percentage 98.53%
cDNA percentage 98.28%
Ka/Ks Ratio 0.07277 (Ka = 0.006, Ks = 0.0822)

Additional orthologs identified in other species via the OPTIC pipeline.

GPX2 (Human)   Gpx2 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 447 bp    Location:38275..34657   Strand:-
Raw sequence 
>bmy_17476
ATGGCTTACATTGCCAAGTCCTTCTACGACCTCAGTGCTATCAGCCTGGATGGGGAGAAGGAGAACTGTCAGAATGAGGAGATCCTGAACAGCCTCAAGTACGTCCGCCCTGGGGGTGGATTCCAGCCCACCTTTACCCTTATCCAAAAGTGTGATGTGAATGGTCAGAATGAGCATCCTGTCTTCACCTACCTGAAGGATAAGCTCCCCTACCCTCACGACGACCCGTTTTCCCTCATGACCGATCCCAAGTTCATCATTTGGAGCCCTGTGCACCGCTCAGACGTGTCTTGGAACTTTGAGAAGTTCCTCATCGGGCCAGAGGGGGAGCCCTTTCGGCGCTACAGCCGCACCTTCCCAACCATCAACATCGAGCCCGACATCAAGCGCCTCCTCAAAGTTGCCAATATAAACACCAGCAGATCTCCTACTTCCTCCTGCCCCTGA

Related Sequences

bmy_17476T0 SequenceType object (3)

Length: 149 aa      
>bmy_17476T0
MAYIAKSFYDLSAISLDGEKENCQNEEILNSLKYVRPGGGFQPTFTLIQKCDVNGQNEHPVFTYLKDKLPYPHDDPFSLMTDPKFIIWSPVHRSDVSWNFEKFLIGPEGEPFRRYSRTFPTINIEPDIKRLLKVANINTSRSPTSSCP*