Part of scaffold_1539 (Scaffold)

For more information consult the page for scaffold_1539 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHURC1-FNTB ENSTTRG00000002692 (Bottlenosed dolphin)

Gene Details

CHURC1-FNTB readthrough

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002524, Bottlenosed dolphin)

Protein Percentage 75.84%
cDNA percentage 76.18%
Ka/Ks Ratio 0.37294 (Ka = 0.0747, Ks = 0.2004)

FNTB ENSBTAG00000005897 (Cow)

Gene Details

Protein farnesyltransferase subunit beta

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007751, Cow)

Protein Percentage 91.76%
cDNA percentage 89.47%
Ka/Ks Ratio 0.19422 (Ka = 0.0606, Ks = 0.3119)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1422 bp    Location:74016..157535   Strand:+
>bmy_17478
ATGGCTTCTCCGAGTTCCTTCACCTACTGTTGCCCTCCATCTTCCTCCCCTGTCTGGTCAGAGCCGCTGTACAGTCTGAGGCCCGAGCACGCGCGGGAGCGGTTGCAGGACGACTCGGTAGAAACAGTCACGTCCATGGAACAGGCAAAAGTAGAAGAAAAGATCCAAGAGGTCTTCAGTTCTTACAAGTTCAACCACCTTGTACCAAGGCTTATTTTGCAGAGGGAGAAGCACTTCCATTACCTGAAGAGAGGCCTCMGACAGCTGACAGATGCCTATGAGTGTCTGGATGCCAGCCGCCCATGGCTCTGCTACTGGATCCTGCACAGCTTGGAACTCCTAGATGAGCCCATTCCCCAGATGGTGGCGACAGACGTGTGTCAGTTCCTGGAGCTGTGTCAAAGCCCAGAAGGTGGCTTTGGAGGGGGCCCTGGCCAGTACCCACACCTTGCGCCCACGTACGCAGCAGTCAATGCGCTGTGCATCATTGGCACCGAAGAGGCCTATGATGTCATTAACAGAGAGAAGCTTCTCCAGTATTTGTACTCGCTGAAGCAACCCGATGGCTCTTTTCTCATGCATGTTGGAGGTGAGGTGGACGTGAGAAGTGCGTACTGTGCCGCCTCGGTAGCTTCTCTGACCAACATCATCACTCCAGACCTGTTTGAGGGCACTGCTGAATGGATCGCAAGGTGTCAGAATTGGGAAGGTGGAATTGGCGGGGTGCCTGGGATGGAAGCCCACGGCGGCTATACTTTCTGTGGCCTGGCCGCACTGGTCATCCTCAAGAAGGAACGCTTCTTAAACTTGAAGAGCTTATTACAATGGGTGACAAGCCGGCAGATGCGGTTTGAAGGTGGATTTCAGGGCCGCTGCAACAAGCTGGTGGATGGCTGCTACTCCTTCTGGCAGGCGGGGCTCCTGCCCCTGCTCCACCGTGCGCTGCACGCCCAAGGTGACCCTGCCCTCAGCATGAGCCGCTGGATGTTTCATCAGCAGGCCCTGCAGGAGTACATTCTTATGTGCTGCCAGTGCCCCACCGGGGGGCTTCTGGATAAACCTGGCAAGTCCCGGGACTTCTACCACACCTGCTACTGCCTGAGCGGCCTGTCCATAGCCCAGCACTTCGGCAGTGGAGCCATGTTGCACGATGTGGTCCTGGGTGTGCCCGAAAACGCCCTGGTCCCTGGCATAGAGCAACACCCCCTGCACCAAATGCGTGCCACCCCAGTGCAGAGTGTGACGCTGCGTGAGTCACAAGCAAGGCCCCGCCAATATCCTGGAGCCAGGGACTGGCTCTCGGGGACGTCCCCTACCCCAGGGCTGGCTCGACTGTTTGCTTCACACTCCATCTCCTCACCAACACGGCCGCAGCTGCAGCTTGGTTCTGATGCCCAGCCTGACCAAGCCAACTGTGTGTAA

Related Sequences

bmy_17478T0 Protein

Length: 474 aa      View alignments
>bmy_17478T0
MASPSSFTYCCPPSSSPVWSEPLYSLRPEHARERLQDDSVETVTSMEQAKVEEKIQEVFSSYKFNHLVPRLILQREKHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQMVATDVCQFLELCQSPEGGFGGGPGQYPHLAPTYAAVNALCIIGTEEAYDVINREKLLQYLYSLKQPDGSFLMHVGGEVDVRSAYCAASVASLTNIITPDLFEGTAEWIARCQNWEGGIGGVPGMEAHGGYTFCGLAALVILKKERFLNLKSLLQWVTSRQMRFEGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSRWMFHQQALQEYILMCCQCPTGGLLDKPGKSRDFYHTCYCLSGLSIAQHFGSGAMLHDVVLGVPENALVPGIEQHPLHQMRATPVQSVTLRESQARPRQYPGARDWLSGTSPTPGLARLFASHSISSPTRPQLQLGSDAQPDQANCV*