Part of scaffold_1516 (Scaffold)

For more information consult the page for scaffold_1516 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRWD1 ENSTTRG00000014847 (Bottlenosed dolphin)

Gene Details

leucine-rich repeats and WD repeat domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014076, Bottlenosed dolphin)

Protein Percentage 96.6%
cDNA percentage 97.06%
Ka/Ks Ratio 0.12477 (Ka = 0.0142, Ks = 0.1139)

DKFZP434K1815 ENSBTAG00000014742 (Cow)

Gene Details

leucine-rich repeat and WD repeat-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019617, Cow)

Protein Percentage 83.8%
cDNA percentage 88.79%
Ka/Ks Ratio 0.19312 (Ka = 0.079, Ks = 0.409)

LRWD1  (Minke Whale)

Gene Details

leucine-rich repeats and WD repeat domain containing 1

External Links

Gene match (Identifier: BACU012045, Minke Whale)

Protein Percentage 98.62%
cDNA percentage 98.98%
Ka/Ks Ratio 0.17152 (Ka = 0.0057, Ks = 0.0334)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2058 bp    Location:32611..43628   Strand:+
>bmy_17486
ACGGATTCGCGCGGCGCCACCTCCTGGAATCGGACAACAGCTGGCGCCAGCACCGGATTCCCGTGCCGCCGATCAGGTCCCCGCGGGCCGCGCCTCCTCGCCATGGGCCCCCTCTCGGCGCGGCTGCTGATTCAGCGGGGGCGACCCAAGAGCGGCCGGCTGGGGAAGATCCGGAGTCTGGACCTGTCAGGGCTGGATCTGCTCTCAGAGCACTTGGACCCCAAGCTCCTGAGCCGCCTGAAGCAGCTGCAAGAGCTGGACCTCTCCAACAACCAACTGGAGACGCTGCCCGCCAACCTGGGCCTGTCCCACCTGCGCATCCTCCGCTGCGCCAACAACCAGTTGGGCGATGTCACTGCCCTGTGCCAGTTCCCACAGCTCGAGGAGCTCAGCCTGGAGGGCAACCCCTTTCTGACAGTCAGTGACAACCTGAAAGTTTCCTTCCTCCTGCCCAAGCTCCGTAAGGTCAACGGCAAGGACGCTTCCTCCACTTGCTCTCAGGTGGAGAACCTGAACCGGGAGCTGACCAGCAGGGTCACAGCTCACTGGGAGAAGTTCGTGGCCGCACTGAGCCCAGAGGAGGAGGCTGAGAAGGCCCAGGCAGACTTTGTGAGGTCTGCTGTCAGAGATGTCCGCTATGGGCCCGAGTCCCTCAGCGACTTCACCCAGTGGCGGGTGCGGATGATCTCTGAGGAGCTGGTGGCCTCTGGTGGGACTCAGGTGCATGAGGCAAACATCTCAGAGAGGCCCCCAAAAGCCACCGCTACCCAGGAGCCTAGGGCCAGGCCAGTGGCCTCGAAGCGGCCAGGTGATGTCCCAGTCAACCTCTCTCCCAACAAGCGGGTGTGCACCTCCCCGTTGGCCCAGGTGGAGGGCAGCCCCGTGGGCTCTGCTGGCAGCCAGACCGCCCTGCAGCTGGAGCCCCTGCACTTCCTGCAGTGCCACAGCAAGAACAACAGCCCTCGTGACCTAGAGACCCAGCTCTGGGCCTGCGCCTTCGAGCCAGCTTGGGACGAGGGGCAGGCAGGGGCCACGTCCCAGACCGTGGCCACGTGTGGCGGGGAGGCCGTGTGTGTGATCGACTGCCAGACGGGCATCGTACTGCACAAGTACAAGGCGCCTAGCGAGGAGTTCTTCTCAGTGGCCTGGACAGCCCTGACAGTGGTCACACAGGCAGGCCACAAGAAGCGCTGGAGCGTGCTGGCAGCTGCAGGCCTGCGGGGCCTGGTCCGGCTGCTGCACGTGCGGGCCGGCTTCTGCTGCGGGCTCATCCGGGCCCACAAGAAGGCCATTGCCACTCTCTGCTTCAGCCCCACGCATGAGACCCACCTCTTCACGGCCTCCTATGACAAGCGGATCATCCTCTGGGACATCGGGGTGCCCAACCACGATTACGAATTCCAGGCCAGCCAGCTGCTCACACTCGACACCACCTCCATCGCCCTCCGCCTCTGCCCCGTCGCCTCCTGCCCGGATGCCTACTTGCTGGCCGGCTGCGAGGGCGGCTGCTGCTGCTGGGACGTGCGGCTGGACCAGCCTCAGAAGAGGAGGGTGTGTGAAGTGGAGTTCGTCTTCCCCGAGGGCTCTGAGGCAACTGGACGGAGAGTGGACGGGCTGGCGTTCGTGAATGAGGACGTCGTGGCCTCCAAGGGGAGTAGCCTGGGCACCATCTGCCTGTGGAGCTGGAGCCAGACGTGGCAGGGCCGGGGCAGCCGGTCCACAGTGGCCGTCGTGGTCCTGGCCCGGCTGCAGTGGTCGCCCACCGAGCTCGCCTACTTCTCACTCAGCACCTGTCCTGATGAGGGGACGGTGCTCTGCGGGGACGAGGAGGGCAACGTGTGGATCTACGACGTCAGGCCCCTGGTGGCGCAGCGGGCCCCGCCGCCGGCCGCCCCGCAGGCCCCCACGCAGATCCTTAAGTGGCCCCAGCCCCGGGCCCTGGGCCAGACAGTGAGCAGGACCATGGTGAACATGGTGGTGGCCGACCCCACCTTTACCTACCTCACGGCGCTGACGGACTCCAACATCGTCGCCATCTGGAGGAGAAACCGGCCTTGA

Related Sequences

bmy_17486T0 Protein

Length: 686 aa      View alignments
>bmy_17486T0
TDSRGATSWNRTTAGASTGFPCRRSGPRGPRLLAMGPLSARLLIQRGRPKSGRLGKIRSLDLSGLDLLSEHLDPKLLSRLKQLQELDLSNNQLETLPANLGLSHLRILRCANNQLGDVTALCQFPQLEELSLEGNPFLTVSDNLKVSFLLPKLRKVNGKDASSTCSQVENLNRELTSRVTAHWEKFVAALSPEEEAEKAQADFVRSAVRDVRYGPESLSDFTQWRVRMISEELVASGGTQVHEANISERPPKATATQEPRARPVASKRPGDVPVNLSPNKRVCTSPLAQVEGSPVGSAGSQTALQLEPLHFLQCHSKNNSPRDLETQLWACAFEPAWDEGQAGATSQTVATCGGEAVCVIDCQTGIVLHKYKAPSEEFFSVAWTALTVVTQAGHKKRWSVLAAAGLRGLVRLLHVRAGFCCGLIRAHKKAIATLCFSPTHETHLFTASYDKRIILWDIGVPNHDYEFQASQLLTLDTTSIALRLCPVASCPDAYLLAGCEGGCCCWDVRLDQPQKRRVCEVEFVFPEGSEATGRRVDGLAFVNEDVVASKGSSLGTICLWSWSQTWQGRGSRSTVAVVVLARLQWSPTELAYFSLSTCPDEGTVLCGDEEGNVWIYDVRPLVAQRAPPPAAPQAPTQILKWPQPRALGQTVSRTMVNMVVADPTFTYLTALTDSNIVAIWRRNRP*