Sequence detailsbmy_17487 (Coding sequence)

Part of scaffold_1516 (SequenceType object (1))

For more information consult the page for scaffold_1516 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000014846 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000014074, Bottlenosed dolphin)

Protein Percentage 74.71%
cDNA percentage 78.93%
Ka/Ks Ratio 0.31698 (Ka = 0.1989, Ks = 0.6276)

POLR2JENSBTAG00000005446 (Cow)

Gene Details

DNA-directed RNA polymerase II subunit RPB11

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007165, Cow)

Protein Percentage 100.0%
cDNA percentage 93.87%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.61)

Additional orthologs identified in other species via the OPTIC pipeline.

POLR2J (Human)   Polr2j (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 264 bp    Location:43645..39400   Strand:-
Raw sequence 
>bmy_17487
ATGAACGCGCCTCCCGCTTTCGAGTCGTTCTTGCTCTTCGAGGGCGAGAAGAAGCAGCTGCTGAAGGACCCACAGGTGCTGTTTGCTGGCTACAAAGTCCCCCATCCCTTGGAACACAAGATCATCATCCGCGTGCAGACCACACCGGACTACAGCCCCCAGGAGGCCTTCACCAATGCCATCACAGACCTCATCAGCGAGCTCTCCCTGCTGGAAGAGCGATTCCGGGTGGCCATCAAAGACAAGCAAGAAGGAATCGAGTAG

Related Sequences

bmy_17487T0 SequenceType object (3)

Length: 88 aa      View alignments
>bmy_17487T0
MNAPPAFESFLLFEGEKKQLLKDPQVLFAGYKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE*