Sequence detailsbmy_17489 (Coding sequence)

Part of scaffold_1516 (SequenceType object (1))

For more information consult the page for scaffold_1516 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.34351ENSBTAG00000020524 (Cow)

Gene Details

uroplakin-3b-like protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027343, Cow)

Protein Percentage 73.14%
cDNA percentage 80.58%
Ka/Ks Ratio 0.27638 (Ka = 0.1668, Ks = 0.6037)

Additional orthologs identified in other species via the OPTIC pipeline.

Upk3bl (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 741 bp    Location:94605..91989   Strand:-
Raw sequence 
>bmy_17489
ACTAGGCGCTGGGGACTTGGTCATCCTGTTGAGCCTCTTCCCTCTGCCCGCACCGGCCCCAGAGCGCATCAGCTATGCGCCCCAGCTCTCAAGCGCCACCCTGGCAGGGAGACTTACCCAGTCCACCTCACACTGGAGCAGCCGCGGGGCCAGTTCAGTCACCTTAACATCTCCGACTTTGACGCCATCTGGCTGGTGTTGGCCCACAGCAATGCCACCCAGAACTTCACTGCCCCACAGAGGGTGGAGGACACCCCGGTCCCTGCCAACTTCCCCCAGAGGGGCTACTACGTCACACTGAGGGCCAACTGCGCACTCTACCCAGGCGGCCAGCCCAGCAACCAGCTCCGGGTCCTCTGTGTCGGCAATGATACCCGCTGCTCCCTAATGACAAGGGGCTGCAACCACCCGCTGCCGGGCCCGGGCCCCTACCGAGTGAAGTTTCTGGTGGTGAGAGACAGGGGACCCATGGCTGAGACAGAGTGGTCCAGTGAGACCCTCCTGCAGCAAGCCGAGGCACTCCAGGCTGCCCCAGGGCCCCAGAGCGTGGGCACCGTGGCCATCATTGCCATCCTGTCGGTCCTGCTGGCCATCCTCCTCACCGCCCTCCTCACCCTGCTCATCTACACCTGCTATGACACCTGTGGGAGCACGTCCATCTCTGGCCCAGGGGAGCTGGTGTGCATGAGAAGATATAACACCCACCACATGTTCAGCCCTTCAGCCGATCGGGGCTCCTGA

Related Sequences

bmy_17489T0 SequenceType object (3)

Length: 247 aa      
>bmy_17489T0
TRRWGLGHPVEPLPSARTGPRAHQLCAPALKRHPGRETYPVHLTLEQPRGQFSHLNISDFDAIWLVLAHSNATQNFTAPQRVEDTPVPANFPQRGYYVTLRANCALYPGGQPSNQLRVLCVGNDTRCSLMTRGCNHPLPGPGPYRVKFLVVRDRGPMAETEWSSETLLQQAEALQAAPGPQSVGTVAIIAILSVLLAILLTALLTLLIYTCYDTCGSTSISGPGELVCMRRYNTHHMFSPSADRGS*