Sequence details bmy_17494 (Coding sequence)

Part of scaffold_1516 (Scaffold)

For more information consult the page for scaffold_1516 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPB1 ENSBTAG00000011969 (Cow)

Gene Details

heat shock protein beta-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015883, Cow)

Protein Percentage 95.02%
cDNA percentage 93.7%
Ka/Ks Ratio 0.05221 (Ka = 0.0204, Ks = 0.3899)

Additional orthologs identified in other species via the OPTIC pipeline.

HSPB1 (Human)   Hspb1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 606 bp    Location:258295..256504   Strand:-
Raw sequence 
>bmy_17494
ATGGCCGAGCGCCGAGTGCCCTTCTCGCTCCTGCGGGGCCCCAGCTGGGACCCTTTCCGCGATTGGTACCCGGCCCACAGCCGCCTCTTCGACCAGGCCTTCGGGCTGCCCCGCCTGCCCGAGGAGTGGTCGCAGTGGCTGAGCCACAGCGGATGGCCGGGCTACGTGCGCCCGCTGTCCGCCGCCGCGATCGAGGGTCCCTCCTACAGCCGCGCGCTCAGCCGGCAGCTCAGCAGCGGCTTCTCGGAGATCCAGCAGACTGCCGACCGCTGGCGCGTGTCCCTGGACGTCAACCACTTCGCCCCCGAGGAACTGACGGTCAAGACCAAGGACGGCGTGGTGGAGATCACTGGCAAGCACGAAGAGCGACAGGACGAGCACGGCTACATTTCCCGGTGCTTCACTCGAAAATACACGCTGCCCCCCGGTGTGGACCCCACCCAGGTCTCCTCCTCCCTGTCCCCCGAGGGCACGCTCACCGTGGAGGCCCCATTGCCCAAGCCAGCCACCCAGTCGGCAGAGATCACCATCCCTGTCACCTTCGAGGCGCGCGCCCAGCTTGGGGGCCCAGAAGCTGGGAAGTCTGAACAGCCTGGAAACAAATAA

Related Sequences

bmy_17494T0 Protein

Length: 202 aa      View alignments
>bmy_17494T0
MAERRVPFSLLRGPSWDPFRDWYPAHSRLFDQAFGLPRLPEEWSQWLSHSGWPGYVRPLSAAAIEGPSYSRALSRQLSSGFSEIQQTADRWRVSLDVNHFAPEELTVKTKDGVVEITGKHEERQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPLPKPATQSAEITIPVTFEARAQLGGPEAGKSEQPGNK*